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Q580K6

- Q580K6_TRYB2

UniProt

Q580K6 - Q580K6_TRYB2

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Protein
Submitted name:

40S ribosomal protein S15a, putative

Gene

Tb11.02.4000

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
40S ribosomal protein S15a, putativeImported
Gene namesi
ORF Names:Tb11.02.4000Imported, Tb927.3.4360Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
Taxonomic identifieri185431 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
ProteomesiUP000008524: Chromosome 11 Scaffold 1, UP000008524: Chromosome 3

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi5691.Tb927.3.4360.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZEYelectron microscopy5.57J1-130[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S8P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0096.
HOGENOMiHOG000204097.
KOiK02957.
OMAiLPAKNFG.

Family and domain databases

InterProiIPR000630. Ribosomal_S8.
[Graphical view]
PANTHERiPTHR11758. PTHR11758. 1 hit.
PfamiPF00410. Ribosomal_S8. 1 hit.
[Graphical view]
SUPFAMiSSF56047. SSF56047. 1 hit.
PROSITEiPS00053. RIBOSOMAL_S8. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q580K6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTMMSVLANA LRCIAGAERR GKRQVLIRPS SKVVVKFLQV MQKHGYIGEF
60 70 80 90 100
EIVDDHRAGK IVVNLNGRLN KCGAICPRFD CTARDFEKWV KNILPSRQFG
110 120 130
FVVLTTSLGI MDHEEARARN TGGKVLGFFY
Length:130
Mass (Da):14,645
Last modified:May 10, 2005 - v1
Checksum:i05991471432979F4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC096673 Genomic DNA. Translation: AAX79341.1.
CP000066 Genomic DNA. Translation: AAZ10469.1.
CH464491 Genomic DNA. Translation: EAN79576.1.
RefSeqiXP_828688.1. XM_823595.1.
XP_844028.1. XM_838935.1.

Genome annotation databases

GeneIDi3656375.
3665648.
KEGGitbr:Tb11.02.4000.
tbr:Tb927.3.4360.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC096673 Genomic DNA. Translation: AAX79341.1 .
CP000066 Genomic DNA. Translation: AAZ10469.1 .
CH464491 Genomic DNA. Translation: EAN79576.1 .
RefSeqi XP_828688.1. XM_823595.1.
XP_844028.1. XM_838935.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZEY electron microscopy 5.57 J 1-130 [» ]
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 5691.Tb927.3.4360.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 3656375.
3665648.
KEGGi tbr:Tb11.02.4000.
tbr:Tb927.3.4360.

Phylogenomic databases

eggNOGi COG0096.
HOGENOMi HOG000204097.
KOi K02957.
OMAi LPAKNFG.

Family and domain databases

InterProi IPR000630. Ribosomal_S8.
[Graphical view ]
PANTHERi PTHR11758. PTHR11758. 1 hit.
Pfami PF00410. Ribosomal_S8. 1 hit.
[Graphical view ]
SUPFAMi SSF56047. SSF56047. 1 hit.
PROSITEi PS00053. RIBOSOMAL_S8. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GUTat10.1Imported.
  2. El-Sayed N.M., Khalak H., Adams M.D.
    Submitted (MAY-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GUTat10.1Imported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 927/4 GUTat10.1Imported.
  4. "The genome of the African trypanosome Trypanosoma brucei."
    Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
    , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
    Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 927/4 GUTat10.1Imported.
  5. Haas B., Blandin G., El-Sayed N.
    Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GUTat10.1Imported.
  6. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
    Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
    Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Entry informationi

Entry nameiQ580K6_TRYB2
AccessioniPrimary (citable) accession number: Q580K6
Secondary accession number(s): D6XDZ2
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: October 29, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3