Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Probable ATP-dependent RNA helicase MJ0669

Gene

MJ0669

Organism
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Catalytic activityi

ATP + H2O = ADP + phosphate.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi51 – 58ATPPROSITE-ProRule annotation8

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Helicase, Hydrolase

Keywords - Ligandi

ATP-binding, Nucleotide-binding, RNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable ATP-dependent RNA helicase MJ0669 (EC:3.6.4.13)
Gene namesi
Ordered Locus Names:MJ0669
OrganismiMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Taxonomic identifieri243232 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
Proteomesi
  • UP000000805 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000551161 – 367Probable ATP-dependent RNA helicase MJ0669Add BLAST367

Interactioni

Subunit structurei

Homodimer.

Protein-protein interaction databases

STRINGi243232.MJ_0669.

Structurei

Secondary structure

1367
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi8 – 10Combined sources3
Helixi15 – 24Combined sources10
Helixi31 – 42Combined sources12
Beta strandi45 – 50Combined sources6
Beta strandi53 – 56Combined sources4
Helixi57 – 68Combined sources12
Beta strandi71 – 74Combined sources4
Beta strandi77 – 80Combined sources4
Helixi84 – 98Combined sources15
Beta strandi105 – 108Combined sources4
Helixi114 – 122Combined sources9
Beta strandi125 – 129Combined sources5
Helixi131 – 139Combined sources9
Beta strandi150 – 155Combined sources6
Helixi156 – 160Combined sources5
Turni161 – 164Combined sources4
Helixi165 – 173Combined sources9
Beta strandi180 – 184Combined sources5
Helixi190 – 199Combined sources10
Beta strandi202 – 207Combined sources6
Beta strandi210 – 220Combined sources11
Helixi223 – 225Combined sources3
Helixi226 – 234Combined sources9
Beta strandi241 – 244Combined sources4
Helixi248 – 260Combined sources13
Beta strandi265 – 268Combined sources4
Beta strandi270 – 272Combined sources3
Helixi274 – 285Combined sources12
Beta strandi288 – 294Combined sources7
Helixi298 – 301Combined sources4
Beta strandi308 – 314Combined sources7
Helixi319 – 325Combined sources7
Beta strandi332 – 334Combined sources3
Beta strandi337 – 342Combined sources6
Helixi347 – 357Combined sources11

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1HV8X-ray3.00A/B1-367[»]
ProteinModelPortaliQ58083.
SMRiQ58083.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ58083.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini38 – 206Helicase ATP-bindingPROSITE-ProRule annotationAdd BLAST169
Domaini213 – 367Helicase C-terminalPROSITE-ProRule annotationAdd BLAST155

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi6 – 34Q motifAdd BLAST29
Motifi154 – 157DEAD box4

Sequence similaritiesi

Belongs to the DEAD box helicase family.Curated
Contains 1 helicase ATP-binding domain.PROSITE-ProRule annotation
Contains 1 helicase C-terminal domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiarCOG00558. Archaea.
COG0513. LUCA.
InParanoidiQ58083.
KOiK05592.
OMAiKYENHTA.
PhylomeDBiQ58083.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000629. RNA-helicase_DEAD-box_CS.
IPR014014. RNA_helicase_DEAD_Q_motif.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00039. DEAD_ATP_HELICASE. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q58083-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEVEYMNFNE LNLSDNILNA IRNKGFEKPT DIQMKVIPLF LNDEYNIVAQ
60 70 80 90 100
ARTGSGKTAS FAIPLIELVN ENNGIEAIIL TPTRELAIQV ADEIESLKGN
110 120 130 140 150
KNLKIAKIYG GKAIYPQIKA LKNANIVVGT PGRILDHINR GTLNLKNVKY
160 170 180 190 200
FILDEADEML NMGFIKDVEK ILNACNKDKR ILLFSATMPR EILNLAKKYM
210 220 230 240 250
GDYSFIKAKI NANIEQSYVE VNENERFEAL CRLLKNKEFY GLVFCKTKRD
260 270 280 290 300
TKELASMLRD IGFKAGAIHG DLSQSQREKV IRLFKQKKIR ILIATDVMSR
310 320 330 340 350
GIDVNDLNCV INYHLPQNPE SYMHRIGRTG RAGKKGKAIS IINRREYKKL
360
RYIERAMKLK IKKLKFG
Length:367
Mass (Da):41,920
Last modified:November 1, 1997 - v1
Checksum:i1B9102E8DF50CB37
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77117 Genomic DNA. Translation: AAB98663.1.
PIRiE64383.
RefSeqiWP_010870174.1. NC_000909.1.

Genome annotation databases

EnsemblBacteriaiAAB98663; AAB98663; MJ_0669.
GeneIDi1451535.
KEGGimja:MJ_0669.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L77117 Genomic DNA. Translation: AAB98663.1.
PIRiE64383.
RefSeqiWP_010870174.1. NC_000909.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1HV8X-ray3.00A/B1-367[»]
ProteinModelPortaliQ58083.
SMRiQ58083.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243232.MJ_0669.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB98663; AAB98663; MJ_0669.
GeneIDi1451535.
KEGGimja:MJ_0669.

Phylogenomic databases

eggNOGiarCOG00558. Archaea.
COG0513. LUCA.
InParanoidiQ58083.
KOiK05592.
OMAiKYENHTA.
PhylomeDBiQ58083.

Miscellaneous databases

EvolutionaryTraceiQ58083.

Family and domain databases

Gene3Di3.40.50.300. 2 hits.
InterProiIPR011545. DEAD/DEAH_box_helicase_dom.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR027417. P-loop_NTPase.
IPR000629. RNA-helicase_DEAD-box_CS.
IPR014014. RNA_helicase_DEAD_Q_motif.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS00039. DEAD_ATP_HELICASE. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51195. Q_MOTIF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiH669_METJA
AccessioniPrimary (citable) accession number: Q58083
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 2, 2016
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Methanococcus jannaschii
    Methanococcus jannaschii: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.