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Q58034

- TTDB_METJA

UniProt

Q58034 - TTDB_METJA

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Protein

Putative L(+)-tartrate dehydratase subunit beta

Gene

MJ0617

Organism
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

(R,R)-tartrate = oxaloacetate + H2O.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei36 – 361Sequence Analysis
Binding sitei104 – 1041SubstrateSequence Analysis

GO - Molecular functioni

  1. fumarate hydratase activity Source: UniProtKB-EC

GO - Biological processi

  1. tricarboxylic acid cycle Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Names & Taxonomyi

Protein namesi
Recommended name:
Putative L(+)-tartrate dehydratase subunit betaBy similarity (EC:4.2.1.32By similarity)
Short name:
L-TTD betaBy similarity
Gene namesi
Ordered Locus Names:MJ0617
OrganismiMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Taxonomic identifieri243232 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
ProteomesiUP000000805: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 195195Putative L(+)-tartrate dehydratase subunit betaPRO_0000195662Add
BLAST

Interactioni

Subunit structurei

Heterotetramer of two alpha and two beta subunits.By similarity

Protein-protein interaction databases

STRINGi243232.MJ0617.

Structurei

3D structure databases

ProteinModelPortaliQ58034.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-I fumarase family.Curated

Phylogenomic databases

eggNOGiCOG1838.
InParanoidiQ58034.
KOiK01678.
OMAiEWQDLGM.
PhylomeDBiQ58034.

Family and domain databases

Gene3Di3.20.130.10. 1 hit.
InterProiIPR004647. Fe-S_hydro-lyase_TtdB-typ_cat.
[Graphical view]
PfamiPF05683. Fumerase_C. 1 hit.
[Graphical view]
SUPFAMiSSF117457. SSF117457. 1 hit.
TIGRFAMsiTIGR00723. ttdB_fumA_fumB. 1 hit.

Sequencei

Sequence statusi: Complete.

Q58034 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEYTFNKLTK KDVKKLKVGD IVYLNGKIYT ARDEAHLKII EMLKSNEKLP
60 70 80 90 100
FDLNESIIYH AGPIMKKVND SWVCVSIGPT TSARMNDVEE EFIKLTNISA
110 120 130 140 150
IVGKGGMKKE LLKTFEDYGV VYLAAPGGCA ALLANSVKRV DNVYFLDELG
160 170 180 190
MPEAVWELEV NNFGPLIVAM DSHGNSIYEE VNKKVYEKLN ELIGL
Length:195
Mass (Da):21,868
Last modified:November 1, 1996 - v1
Checksum:iA5FDEB0E77D00902
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L77117 Genomic DNA. Translation: AAB98612.1.
PIRiA64377.
RefSeqiNP_247601.1. NC_000909.1.
WP_010870122.1. NC_000909.1.

Genome annotation databases

EnsemblBacteriaiAAB98612; AAB98612; MJ_0617.
GeneIDi1451483.
KEGGimja:MJ_0617.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
L77117 Genomic DNA. Translation: AAB98612.1 .
PIRi A64377.
RefSeqi NP_247601.1. NC_000909.1.
WP_010870122.1. NC_000909.1.

3D structure databases

ProteinModelPortali Q58034.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 243232.MJ0617.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAB98612 ; AAB98612 ; MJ_0617 .
GeneIDi 1451483.
KEGGi mja:MJ_0617.

Phylogenomic databases

eggNOGi COG1838.
InParanoidi Q58034.
KOi K01678.
OMAi EWQDLGM.
PhylomeDBi Q58034.

Family and domain databases

Gene3Di 3.20.130.10. 1 hit.
InterProi IPR004647. Fe-S_hydro-lyase_TtdB-typ_cat.
[Graphical view ]
Pfami PF05683. Fumerase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF117457. SSF117457. 1 hit.
TIGRFAMsi TIGR00723. ttdB_fumA_fumB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

Entry informationi

Entry nameiTTDB_METJA
AccessioniPrimary (citable) accession number: Q58034
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: October 29, 2014
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Methanococcus jannaschii
    Methanococcus jannaschii: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3