Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q57YL6

- Q57YL6_TRYB2

UniProt

Q57YL6 - Q57YL6_TRYB2

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

40S ribosomal protein S8

Gene

Tb927.8.6150

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: GeneDB_Tbrucei

GO - Biological processi

  1. translation Source: GeneDB_Tbrucei
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S8UniRule annotation
Gene namesi
ORF Names:Tb927.8.6150Imported, Tb927.8.6160Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
Taxonomic identifieri185431 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
ProteomesiUP000008524: Chromosome 8

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: GeneDB_Tbrucei
Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZEYelectron microscopy5.5751-220[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S8e family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2007.
HOGENOMiHOG000211544.
KOiK02995.
OMAiWRVCERE.

Family and domain databases

InterProiIPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
[Graphical view]
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiPF01201. Ribosomal_S8e. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00307. S8e. 1 hit.
PROSITEiPS01193. RIBOSOMAL_S8E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q57YL6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGIVRSRLHK RKITGGKTKI HRKRMKAELG RLPANTKLGP RRVSPVRARG
60 70 80 90 100
GNFKLRGLRL DTGNFAWGTE ASAQRARILD VVYNATSNEL VRTKTLVKNC
110 120 130 140 150
IVVVDAAPFR LWYAKHYGID LGASKSKKAT QKSTEKKSKK SAHAAVEKYD
160 170 180 190 200
VKKASSKLKR KWEYRRKHHK IEKALADQLR EGRLLARITS RPGQTGRADG
210 220
ALLEGAELQF YLKKLDKKKR
Length:220
Mass (Da):24,937
Last modified:May 10, 2005 - v1
Checksum:i4663D9FCF5F4AA49
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC159405 Genomic DNA. Translation: AAX69270.1.
AC159405 Genomic DNA. Translation: AAX69272.1.
CP000071 Genomic DNA. Translation: AAZ13379.1.
CP000071 Genomic DNA. Translation: AAZ13380.1.
RefSeqiXP_847445.1. XM_842352.1.
XP_847446.1. XM_842353.1.

Genome annotation databases

GeneIDi3659617.
3659618.
KEGGitbr:Tb927.8.6150.
tbr:Tb927.8.6160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC159405 Genomic DNA. Translation: AAX69270.1 .
AC159405 Genomic DNA. Translation: AAX69272.1 .
CP000071 Genomic DNA. Translation: AAZ13379.1 .
CP000071 Genomic DNA. Translation: AAZ13380.1 .
RefSeqi XP_847445.1. XM_842352.1.
XP_847446.1. XM_842353.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZEY electron microscopy 5.57 5 1-220 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 3659617.
3659618.
KEGGi tbr:Tb927.8.6150.
tbr:Tb927.8.6160.

Phylogenomic databases

eggNOGi COG2007.
HOGENOMi HOG000211544.
KOi K02995.
OMAi WRVCERE.

Family and domain databases

InterProi IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
[Graphical view ]
PANTHERi PTHR10394. PTHR10394. 1 hit.
Pfami PF01201. Ribosomal_S8e. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00307. S8e. 1 hit.
PROSITEi PS01193. RIBOSOMAL_S8E. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 927/4 GUTat10.1Imported.
  2. "The genome of the African trypanosome Trypanosoma brucei."
    Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
    , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
    Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 927/4 GUTat10.1Imported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GUTat10.1Imported.
  4. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
    Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
    Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Entry informationi

Entry nameiQ57YL6_TRYB2
AccessioniPrimary (citable) accession number: Q57YL6
Secondary accession number(s): D6XLZ9
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: October 29, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3