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Q57XX0

- Q57XX0_TRYB2

UniProt

Q57XX0 - Q57XX0_TRYB2

Protein
Submitted name:

40S ribosomal protein S25, putative

Gene

Tb10.70.4800

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    40S ribosomal protein S25, putativeImported
    Submitted name:
    Ribosomal protein S25, putativeImported
    Gene namesi
    ORF Names:Tb10.70.4800Imported, Tb927.3.1370Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 10, UP000008524: Chromosome 3

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Interactioni

    Protein-protein interaction databases

    STRINGi5691.Tb927.3.1370.

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZEYelectron microscopy5.57U1-113[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG4901.
    HOGENOMiHOG000203673.
    KOiK02975.
    OMAiCLPTRIS.

    Family and domain databases

    InterProiIPR004977. Ribosomal_S25.
    [Graphical view]
    PANTHERiPTHR12850. PTHR12850. 1 hit.
    PfamiPF03297. Ribosomal_S25. 1 hit.
    [Graphical view]
    ProDomiPD012268. Ribosomal_S25. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    Q57XX0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPPKKGGKDT KQAPKKGKME NLNKGAKKAA KKWSKGRTRE ALQNAVMFDK    50
    ETMDKLMKEV PKYKVITPSI ISDRLKISVA LAGKGLQHLC RQGLIRLVSC 100
    SSKFRVYTRA ATA 113
    Length:113
    Mass (Da):12,560
    Last modified:May 10, 2005 - v1
    Checksum:i693368E6070493D7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC159411 Genomic DNA. Translation: AAX69549.1.
    CP000066 Genomic DNA. Translation: AAZ10172.1.
    CM000208 Genomic DNA. Translation: EAN77709.1.
    RefSeqiXP_822537.1. XM_817444.1.
    XP_843731.1. XM_838638.1.

    Genome annotation databases

    EnsemblProtistsiAAZ10172; AAZ10172; Tb927.3.1370.
    EAN77709; EAN77709; Tb10.70.4800.
    GeneIDi3656068.
    3662403.
    KEGGitbr:Tb10.70.4800.
    tbr:Tb927.3.1370.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC159411 Genomic DNA. Translation: AAX69549.1 .
    CP000066 Genomic DNA. Translation: AAZ10172.1 .
    CM000208 Genomic DNA. Translation: EAN77709.1 .
    RefSeqi XP_822537.1. XM_817444.1.
    XP_843731.1. XM_838638.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZEY electron microscopy 5.57 U 1-113 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 5691.Tb927.3.1370.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi AAZ10172 ; AAZ10172 ; Tb927.3.1370 .
    EAN77709 ; EAN77709 ; Tb10.70.4800 .
    GeneIDi 3656068.
    3662403.
    KEGGi tbr:Tb10.70.4800.
    tbr:Tb927.3.1370.

    Phylogenomic databases

    eggNOGi COG4901.
    HOGENOMi HOG000203673.
    KOi K02975.
    OMAi CLPTRIS.

    Family and domain databases

    InterProi IPR004977. Ribosomal_S25.
    [Graphical view ]
    PANTHERi PTHR12850. PTHR12850. 1 hit.
    Pfami PF03297. Ribosomal_S25. 1 hit.
    [Graphical view ]
    ProDomi PD012268. Ribosomal_S25. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    2. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    3. "Sequencing, closure, and annotation of Trypanosoma brucei chromosomes 2 through 8."
      Ghedin E., Blandin G., Bartholomeu D., Caler E., Haas B., Hannick L., Shallom J., Hou L., Djikeng A., Feldblyum T., Hostetler J., Johnson J., Jones K., Koo H.L., Larkin C., Pai G., Peterson J., Khalak H.G.
      , Salzberg S., Simpson A.J., Tallon L., Van Aken S., Wanless D., White O., Wortman J., Fraser C.M., El-Sayed N.M.A.
      Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: GUTat10.1Imported.
    5. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ57XX0_TRYB2
    AccessioniPrimary (citable) accession number: Q57XX0
    Secondary accession number(s): D6XD45
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 10, 2005
    Last sequence update: May 10, 2005
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3