Q57XX0 (Q57XX0_TRYB2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
40S ribosomal protein S25, putative EMBL AAX69549.1

Submitted name:
Ribosomal protein S25, putative EMBL EAN77709.1

Gene names

ORF Names:

Tb10.70.4800 EMBL EAN77709.1, Tb927.3.1370 EMBL AAX69549.1

Organism

Trypanosoma brucei brucei (strain 927/4 GUTat10.1) [Reference proteome]

Taxonomic identifier

999953 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Euglenozoa › Kinetoplastida › Trypanosomatidae › Trypanosoma › Trypanozoon › Trypanosoma brucei › Trypanosoma brucei brucei

Protein attributes

Sequence length	113 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein EMBL AAX69549.1
Technical term	3D-structure PDB 3ZEY Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q57XX0 [UniParc]. Last modified May 10, 2005. Version 1. Checksum: 693368E6070493D7	FASTA	113	12,560
	10 20 30 40 50 60 MPPKKGGKDT KQAPKKGKME NLNKGAKKAA KKWSKGRTRE ALQNAVMFDK ETMDKLMKEV 70 80 90 100 110 PKYKVITPSI ISDRLKISVA LAGKGLQHLC RQGLIRLVSC SSKFRVYTRA ATA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Comparative genomics of trypanosomatid parasitic protozoa." El-Sayed N.M.A., Myler P.J., Blandin G., Berriman M., Crabtree J., Aggarwal G., Caler E., Renauld H., Worthey E.A., Hertz-Fowler C., Ghedin E., Peacock C., Bartholomeu D.C., Haas B.J., Tran A.-N., Wortman J.R., Alsmark U.C.M., Angiuoli S. , Anupama A., Badger J., Bringaud F., Cadag E., Carlton J.M., Cerqueira G.C., Creasy T., Delcher A.L., Djikeng A., Embley T.M., Hauser C., Ivens A.C., Kummerfeld S.K., Pereira-Leal J.B., Nilsson D., Peterson J., Salzberg S.L., Shallom J., Silva J.C., Sundaram J., Westenberger S., White O., Melville S.E., Donelson J.E., Andersson B., Stuart K.D., Hall N. Science 309:404-409(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: 927/4 GUTat10.1 EMBL AAZ10172.1.
[2]	"The genome of the African trypanosome Trypanosoma brucei." Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M. , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A. Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 927/4 GUTat10.1 EMBL AAZ10172.1.
[3]	"Sequencing, closure, and annotation of Trypanosoma brucei chromosomes 2 through 8." Ghedin E., Blandin G., Bartholomeu D., Caler E., Haas B., Hannick L., Shallom J., Hou L., Djikeng A., Feldblyum T., Hostetler J., Johnson J., Jones K., Koo H.L., Larkin C., Pai G., Peterson J., Khalak H.G. , Salzberg S., Simpson A.J., Tallon L., Van Aken S., Wanless D., White O., Wortman J., Fraser C.M., El-Sayed N.M.A. Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: 927/4 GUTat10.1 EMBL AAZ10172.1.
[4]	Ghedin E., Blandin G., Bartholomeu D., Caler E., Haas B., Hannick L., Shallom J., Hou L., Djikeng A., Feldblyum T., Hostetler J., Johnson J., Jones K., Koo H.L., Larkin C., Pai G., Peterson J., Khalak H.G. , Salzberg S., Simpson A.J., Tallon L., Van Aken S., Wanless D., White O., Wortman J., Fraser C.M., El-Sayed N.M.A. Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: GUTat10.1 EMBL AAX69549.1.
[5]	"High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome." Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J. Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AC159411 Genomic DNA. Translation: AAX69549.1.
CP000066 Genomic DNA. Translation: AAZ10172.1.
CM000208 Genomic DNA. Translation: EAN77709.1.

RefSeq

XP_822537.1. XM_817444.1.
XP_843731.1. XM_838638.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3ZEY	electron microscopy	5.57	U	1-113	[»]

ModBase

Search...

Protein-protein interaction databases

STRING

5691.Tb927.3.1370.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblProtists

AAZ10172; AAZ10172; Tb927.3.1370.
EAN77709; EAN77709; Tb10.70.4800.

GeneID

3656068.
3662403.

KEGG

tbr:Tb10.70.4800.
tbr:Tb927.3.1370.

Organism-specific databases

EuPathDB

TriTrypDB:Tb927.3.1370.

Phylogenomic databases

eggNOG

COG4901.

HOGENOM

HOG000203673.

KO

K02975.

OMA

YKMITIS.

ProtClustDB

CLSZ2443493.

Family and domain databases

InterPro

IPR004977. Ribosomal_S25.
[Graphical view]

PANTHER

PTHR12850. PTHR12850. 1 hit.

Pfam

PF03297. Ribosomal_S25. 1 hit.
[Graphical view]

ProDom

PD012268. Ribosomal_S25. 1 hit.
[Graphical view] [Entries sharing at least one domain]

ProtoNet

Search...

Entry information

Entry name

Q57XX0_TRYB2

Accession

Primary (citable) accession number: Q57XX0
Secondary accession number(s): D6XD45

Entry history

Integrated into UniProtKB/TrEMBL:	May 10, 2005
Last sequence update:	May 10, 2005
Last modified:	May 29, 2013
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)