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Q57XN7

- Q57XN7_TRYB2

UniProt

Q57XN7 - Q57XN7_TRYB2

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Protein
Submitted name:

40S ribosomal protein S15, putative

Gene
Tb927.7.2340, Tb927.7.2370
Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. RNA binding Source: InterPro
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
40S ribosomal protein S15, putativeImported
Gene namesi
ORF Names:Tb927.7.2340Imported, Tb927.7.2370Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)
Taxonomic identifieri999953 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
ProteomesiUP000008524: Chromosome 7

Subcellular locationi

GO - Cellular componenti

  1. small ribosomal subunit Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZEYelectron microscopy5.57I1-152[»]

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S19P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0185.
HOGENOMiHOG000111561.
KOiK02958.
OMAiYCARQRR.

Family and domain databases

Gene3Di3.30.860.10. 1 hit.
HAMAPiMF_00531. Ribosomal_S19.
InterProiIPR002222. Ribosomal_S19.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
IPR005713. Ribosomal_S19A/S15e.
[Graphical view]
PANTHERiPTHR11880. PTHR11880. 1 hit.
PfamiPF00203. Ribosomal_S19. 1 hit.
[Graphical view]
PIRSFiPIRSF002144. Ribosomal_S19. 1 hit.
PRINTSiPR00975. RIBOSOMALS19.
SUPFAMiSSF54570. SSF54570. 1 hit.
TIGRFAMsiTIGR01025. rpsS_arch. 1 hit.
PROSITEiPS00323. RIBOSOMAL_S19. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q57XN7-1 [UniParc]FASTAAdd to Basket

« Hide

MASNITQERY EQLKKERTFH KFTYRGHEID PLLALTEEEF KALVHARARR    50
RMNRHADRRA PVLLKRLREA KKNVKAGEKP KAVKTHLRDV VITPEMVGSV 100
VGIYNGRQFN AVEIKGEMIG HYLGEFSLTY KPVAHGRPGF GATHSSRFIP 150
LK 152
Length:152
Mass (Da):17,474
Last modified:May 10, 2005 - v1
Checksum:iA2811B2538FF7B29
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC159413 Genomic DNA. Translation: AAX69630.1.
AC159413 Genomic DNA. Translation: AAX69636.1.
CP000070 Genomic DNA. Translation: AAZ12298.1.
CP000070 Genomic DNA. Translation: AAZ12301.1.
RefSeqiXP_845857.1. XM_840764.1.
XP_845860.1. XM_840767.1.

Genome annotation databases

EnsemblProtistsiAAZ12298; AAZ12298; Tb927.7.2340.
AAZ12301; AAZ12301; Tb927.7.2370.
GeneIDi3658443.
3658452.
KEGGitbr:Tb927.7.2340.
tbr:Tb927.7.2370.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC159413 Genomic DNA. Translation: AAX69630.1 .
AC159413 Genomic DNA. Translation: AAX69636.1 .
CP000070 Genomic DNA. Translation: AAZ12298.1 .
CP000070 Genomic DNA. Translation: AAZ12301.1 .
RefSeqi XP_845857.1. XM_840764.1.
XP_845860.1. XM_840767.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZEY electron microscopy 5.57 I 1-152 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi AAZ12298 ; AAZ12298 ; Tb927.7.2340 .
AAZ12301 ; AAZ12301 ; Tb927.7.2370 .
GeneIDi 3658443.
3658452.
KEGGi tbr:Tb927.7.2340.
tbr:Tb927.7.2370.

Phylogenomic databases

eggNOGi COG0185.
HOGENOMi HOG000111561.
KOi K02958.
OMAi YCARQRR.

Family and domain databases

Gene3Di 3.30.860.10. 1 hit.
HAMAPi MF_00531. Ribosomal_S19.
InterProi IPR002222. Ribosomal_S19.
IPR020934. Ribosomal_S19_CS.
IPR023575. Ribosomal_S19_SF.
IPR005713. Ribosomal_S19A/S15e.
[Graphical view ]
PANTHERi PTHR11880. PTHR11880. 1 hit.
Pfami PF00203. Ribosomal_S19. 1 hit.
[Graphical view ]
PIRSFi PIRSF002144. Ribosomal_S19. 1 hit.
PRINTSi PR00975. RIBOSOMALS19.
SUPFAMi SSF54570. SSF54570. 1 hit.
TIGRFAMsi TIGR01025. rpsS_arch. 1 hit.
PROSITEi PS00323. RIBOSOMAL_S19. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 927/4 GUTat10.1Imported.
  2. "The genome of the African trypanosome Trypanosoma brucei."
    Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
    , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
    Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 927/4 GUTat10.1Imported.
  3. "Sequencing, closure, and annotation of Trypanosoma brucei chromosomes 2 through 8."
    Ghedin E., Blandin G., Bartholomeu D., Caler E., Haas B., Hannick L., Shallom J., Hou L., Djikeng A., Feldblyum T., Hostetler J., Johnson J., Jones K., Koo H.L., Larkin C., Pai G., Peterson J., Khalak H.G.
    , Salzberg S., Simpson A.J., Tallon L., Van Aken S., Wanless D., White O., Wortman J., Fraser C.M., El-Sayed N.M.A.
    Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 927/4 GUTat10.1Imported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GUTat10.1Imported.
  5. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
    Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
    Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Entry informationi

Entry nameiQ57XN7_TRYB2
AccessioniPrimary (citable) accession number: Q57XN7
Secondary accession number(s): D6XKF1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: May 14, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

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