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Q57VM1

- Q57VM1_TRYB2

UniProt

Q57VM1 - Q57VM1_TRYB2

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Protein
Submitted name:

60S ribosomal protein L7a, putative

Gene
Tb927.8.1330, Tb927.8.1340
Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L7a, putativeImported
Gene namesi
ORF Names:Tb927.8.1330Imported, Tb927.8.1340Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)
Taxonomic identifieri999953 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
ProteomesiUP000008524: Chromosome 8

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZF7electron microscopy5.57x1-276[»]

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1358.
HOGENOMiHOG000216644.
KOiK02936.
OMAiPKYIRVQ.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
InterProiIPR029064. L30e-like.
IPR001921. Ribosomal_L7A/L8.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
IPR018492. Ribosomal_L7Ae/L8/Nhp2.
[Graphical view]
PANTHERiPTHR23105:SF1. PTHR23105:SF1. 1 hit.
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
PRINTSiPR00881. L7ARS6FAMILY.
PR00882. RIBOSOMALL7A.
SUPFAMiSSF55315. SSF55315. 1 hit.

Sequencei

Sequence statusi: Complete.

Q57VM1-1 [UniParc]FASTAAdd to Basket

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MAGKEVKKAV KPTKKAGVPY KKPEVTQKKA KASAAAPSPF VARPKDFGIG    50
RDVPYARDLS RFMRWPTFVT MQRKKRVLQR RLKVPPALNQ FTKVLDRSSR 100
NELLKLVKKY APETRKARRD RLTKVAEEKK KNPKGTVSTK APLCVVSGLQ 150
EVTRTIEKKT ARLVLIANNV DPIELVLWMP TLCRANKIPY AIVKDKARLG 200
DAIGRKTATC VAFTDVNAED QAALKNLTRS VNARFLARSD VIRRQWGGLQ 250
LSLRSRAELR KKRARTAGND AAAKAA 276
Length:276
Mass (Da):30,879
Last modified:May 10, 2005 - v1
Checksum:i31FA8793A72FAB61
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC159438 Genomic DNA. Translation: AAX70336.1.
AC159438 Genomic DNA. Translation: AAX70337.1.
CP000071 Genomic DNA. Translation: AAZ12903.1.
CP000071 Genomic DNA. Translation: AAZ12904.1.
RefSeqiXP_846969.1. XM_841876.1.
XP_846970.1. XM_841877.1.

Genome annotation databases

EnsemblProtistsiAAZ12903; AAZ12903; Tb927.8.1330.
AAZ12904; AAZ12904; Tb927.8.1340.
GeneIDi3659108.
3659111.
KEGGitbr:Tb927.8.1330.
tbr:Tb927.8.1340.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC159438 Genomic DNA. Translation: AAX70336.1 .
AC159438 Genomic DNA. Translation: AAX70337.1 .
CP000071 Genomic DNA. Translation: AAZ12903.1 .
CP000071 Genomic DNA. Translation: AAZ12904.1 .
RefSeqi XP_846969.1. XM_841876.1.
XP_846970.1. XM_841877.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZF7 electron microscopy 5.57 x 1-276 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi AAZ12903 ; AAZ12903 ; Tb927.8.1330 .
AAZ12904 ; AAZ12904 ; Tb927.8.1340 .
GeneIDi 3659108.
3659111.
KEGGi tbr:Tb927.8.1330.
tbr:Tb927.8.1340.

Phylogenomic databases

eggNOGi COG1358.
HOGENOMi HOG000216644.
KOi K02936.
OMAi PKYIRVQ.

Family and domain databases

Gene3Di 3.30.1330.30. 1 hit.
InterProi IPR029064. L30e-like.
IPR001921. Ribosomal_L7A/L8.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
IPR018492. Ribosomal_L7Ae/L8/Nhp2.
[Graphical view ]
PANTHERi PTHR23105:SF1. PTHR23105:SF1. 1 hit.
Pfami PF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view ]
PRINTSi PR00881. L7ARS6FAMILY.
PR00882. RIBOSOMALL7A.
SUPFAMi SSF55315. SSF55315. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 927/4 GUTat10.1Imported.
  2. "The genome of the African trypanosome Trypanosoma brucei."
    Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
    , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
    Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 927/4 GUTat10.1Imported.
  3. "Sequencing, closure, and annotation of Trypanosoma brucei chromosomes 2 through 8."
    Ghedin E., Blandin G., Bartholomeu D., Caler E., Haas B., Hannick L., Shallom J., Hou L., Djikeng A., Feldblyum T., Hostetler J., Johnson J., Jones K., Koo H.L., Larkin C., Pai G., Peterson J., Khalak H.G.
    , Salzberg S., Simpson A.J., Tallon L., Van Aken S., Wanless D., White O., Wortman J., Fraser C.M., El-Sayed N.M.A.
    Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 927/4 GUTat10.1Imported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GUTat10.1Imported.
  5. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
    Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
    Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Entry informationi

Entry nameiQ57VM1_TRYB2
AccessioniPrimary (citable) accession number: Q57VM1
Secondary accession number(s): D6XMW1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: June 11, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteome

External Data

Dasty 3

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