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Q57VM1

- Q57VM1_TRYB2

UniProt

Q57VM1 - Q57VM1_TRYB2

Protein
Submitted name:

60S ribosomal protein L7a, putative

Gene

Tb927.8.1330

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 52 (01 Oct 2014)
      Sequence version 1 (10 May 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: GeneDB_Tbrucei

    GO - Biological processi

    1. translation Source: GeneDB_Tbrucei

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    60S ribosomal protein L7a, putativeImported
    Gene namesi
    ORF Names:Tb927.8.1330Imported, Tb927.8.1340Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 8

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: GeneDB_Tbrucei

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZF7electron microscopy5.57x1-276[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1358.
    HOGENOMiHOG000216644.
    KOiK02936.
    OMAiPKYIRVQ.

    Family and domain databases

    Gene3Di3.30.1330.30. 1 hit.
    InterProiIPR029064. L30e-like.
    IPR001921. Ribosomal_L7A/L8.
    IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
    IPR018492. Ribosomal_L7Ae/L8/Nhp2.
    [Graphical view]
    PANTHERiPTHR23105:SF1. PTHR23105:SF1. 1 hit.
    PfamiPF01248. Ribosomal_L7Ae. 1 hit.
    [Graphical view]
    PRINTSiPR00881. L7ARS6FAMILY.
    PR00882. RIBOSOMALL7A.
    SUPFAMiSSF55315. SSF55315. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q57VM1-1 [UniParc]FASTAAdd to Basket

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    MAGKEVKKAV KPTKKAGVPY KKPEVTQKKA KASAAAPSPF VARPKDFGIG    50
    RDVPYARDLS RFMRWPTFVT MQRKKRVLQR RLKVPPALNQ FTKVLDRSSR 100
    NELLKLVKKY APETRKARRD RLTKVAEEKK KNPKGTVSTK APLCVVSGLQ 150
    EVTRTIEKKT ARLVLIANNV DPIELVLWMP TLCRANKIPY AIVKDKARLG 200
    DAIGRKTATC VAFTDVNAED QAALKNLTRS VNARFLARSD VIRRQWGGLQ 250
    LSLRSRAELR KKRARTAGND AAAKAA 276
    Length:276
    Mass (Da):30,879
    Last modified:May 10, 2005 - v1
    Checksum:i31FA8793A72FAB61
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC159438 Genomic DNA. Translation: AAX70336.1.
    AC159438 Genomic DNA. Translation: AAX70337.1.
    CP000071 Genomic DNA. Translation: AAZ12903.1.
    CP000071 Genomic DNA. Translation: AAZ12904.1.
    RefSeqiXP_846969.1. XM_841876.1.
    XP_846970.1. XM_841877.1.

    Genome annotation databases

    EnsemblProtistsiAAZ12903; AAZ12903; Tb927.8.1330.
    AAZ12904; AAZ12904; Tb927.8.1340.
    GeneIDi3659108.
    3659111.
    KEGGitbr:Tb927.8.1330.
    tbr:Tb927.8.1340.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC159438 Genomic DNA. Translation: AAX70336.1 .
    AC159438 Genomic DNA. Translation: AAX70337.1 .
    CP000071 Genomic DNA. Translation: AAZ12903.1 .
    CP000071 Genomic DNA. Translation: AAZ12904.1 .
    RefSeqi XP_846969.1. XM_841876.1.
    XP_846970.1. XM_841877.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZF7 electron microscopy 5.57 x 1-276 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi AAZ12903 ; AAZ12903 ; Tb927.8.1330 .
    AAZ12904 ; AAZ12904 ; Tb927.8.1340 .
    GeneIDi 3659108.
    3659111.
    KEGGi tbr:Tb927.8.1330.
    tbr:Tb927.8.1340.

    Phylogenomic databases

    eggNOGi COG1358.
    HOGENOMi HOG000216644.
    KOi K02936.
    OMAi PKYIRVQ.

    Family and domain databases

    Gene3Di 3.30.1330.30. 1 hit.
    InterProi IPR029064. L30e-like.
    IPR001921. Ribosomal_L7A/L8.
    IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
    IPR018492. Ribosomal_L7Ae/L8/Nhp2.
    [Graphical view ]
    PANTHERi PTHR23105:SF1. PTHR23105:SF1. 1 hit.
    Pfami PF01248. Ribosomal_L7Ae. 1 hit.
    [Graphical view ]
    PRINTSi PR00881. L7ARS6FAMILY.
    PR00882. RIBOSOMALL7A.
    SUPFAMi SSF55315. SSF55315. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    2. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    3. "Sequencing, closure, and annotation of Trypanosoma brucei chromosomes 2 through 8."
      Ghedin E., Blandin G., Bartholomeu D., Caler E., Haas B., Hannick L., Shallom J., Hou L., Djikeng A., Feldblyum T., Hostetler J., Johnson J., Jones K., Koo H.L., Larkin C., Pai G., Peterson J., Khalak H.G.
      , Salzberg S., Simpson A.J., Tallon L., Van Aken S., Wanless D., White O., Wortman J., Fraser C.M., El-Sayed N.M.A.
      Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: GUTat10.1Imported.
    5. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ57VM1_TRYB2
    AccessioniPrimary (citable) accession number: Q57VM1
    Secondary accession number(s): D6XMW1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 10, 2005
    Last sequence update: May 10, 2005
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3