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Q57V35

- Q57V35_TRYB2

UniProt

Q57V35 - Q57V35_TRYB2

Protein
Submitted name:

60S ribosomal protein L7, putative

Gene

Tb927.7.1740

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (10 May 2005)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: GeneDB_Tbrucei

    GO - Biological processi

    1. ribosome biogenesis Source: GeneDB_Tbrucei

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    60S ribosomal protein L7, putativeImported
    Gene namesi
    ORF Names:Tb927.7.1740Imported, Tb927.7.1750Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 7

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: GeneDB_Tbrucei

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZF7electron microscopy5.57w1-257[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L30P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1841.
    HOGENOMiHOG000170917.
    KOiK02937.
    OMAiVIHEIFT.

    Family and domain databases

    Gene3Di3.30.1390.20. 2 hits.
    InterProiIPR018038. Ribosomal_L30_CS.
    IPR016082. Ribosomal_L30_ferredoxin-like.
    IPR012988. Ribosomal_L30_N.
    IPR005998. Ribosomal_L7_euk.
    [Graphical view]
    PfamiPF00327. Ribosomal_L30. 1 hit.
    PF08079. Ribosomal_L30_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF55129. SSF55129. 1 hit.
    TIGRFAMsiTIGR01310. L7. 1 hit.
    PROSITEiPS00634. RIBOSOMAL_L30. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q57V35-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFMTGLILLG KGREVMPAKA VPAPESAIKR AAFKQQQTEN FKKAIAANKV    50
    AAAALKKLAY SRGLKYSREY RSTEKKLAGL RRNARQHGNY YLEAKPKVAV 100
    VTRIRGIAKV PPKQRKILQL LRLRQIFNTV FVRLNKPMEN MLRAVEPYIA 150
    YGYPSLSTVR AMVYKRGHLK INGQRVKITD NQMIKDKYHN DDIVCAEDIV 200
    NQIYACGKHF RTVTNGLWPF KLAPPAGGMR QKRRHFVEGG DYGNRDTLIN 250
    RFLARMI 257
    Length:257
    Mass (Da):29,361
    Last modified:May 10, 2005 - v1
    Checksum:iE78D065B6E6DA7A6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC159447 Genomic DNA. Translation: AAX70533.1.
    AC159447 Genomic DNA. Translation: AAX70534.1.
    CP000070 Genomic DNA. Translation: AAZ12239.1.
    CP000070 Genomic DNA. Translation: AAZ12240.1.
    RefSeqiXP_845798.1. XM_840705.1.
    XP_845799.1. XM_840706.1.

    Genome annotation databases

    EnsemblProtistsiAAZ12239; AAZ12239; Tb927.7.1740.
    AAZ12240; AAZ12240; Tb927.7.1750.
    GeneIDi3658383.
    3658390.
    KEGGitbr:Tb927.7.1740.
    tbr:Tb927.7.1750.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC159447 Genomic DNA. Translation: AAX70533.1 .
    AC159447 Genomic DNA. Translation: AAX70534.1 .
    CP000070 Genomic DNA. Translation: AAZ12239.1 .
    CP000070 Genomic DNA. Translation: AAZ12240.1 .
    RefSeqi XP_845798.1. XM_840705.1.
    XP_845799.1. XM_840706.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZF7 electron microscopy 5.57 w 1-257 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi AAZ12239 ; AAZ12239 ; Tb927.7.1740 .
    AAZ12240 ; AAZ12240 ; Tb927.7.1750 .
    GeneIDi 3658383.
    3658390.
    KEGGi tbr:Tb927.7.1740.
    tbr:Tb927.7.1750.

    Phylogenomic databases

    eggNOGi COG1841.
    HOGENOMi HOG000170917.
    KOi K02937.
    OMAi VIHEIFT.

    Family and domain databases

    Gene3Di 3.30.1390.20. 2 hits.
    InterProi IPR018038. Ribosomal_L30_CS.
    IPR016082. Ribosomal_L30_ferredoxin-like.
    IPR012988. Ribosomal_L30_N.
    IPR005998. Ribosomal_L7_euk.
    [Graphical view ]
    Pfami PF00327. Ribosomal_L30. 1 hit.
    PF08079. Ribosomal_L30_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55129. SSF55129. 1 hit.
    TIGRFAMsi TIGR01310. L7. 1 hit.
    PROSITEi PS00634. RIBOSOMAL_L30. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    2. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    3. "Sequencing, closure, and annotation of Trypanosoma brucei chromosomes 2 through 8."
      Ghedin E., Blandin G., Bartholomeu D., Caler E., Haas B., Hannick L., Shallom J., Hou L., Djikeng A., Feldblyum T., Hostetler J., Johnson J., Jones K., Koo H.L., Larkin C., Pai G., Peterson J., Khalak H.G.
      , Salzberg S., Simpson A.J., Tallon L., Van Aken S., Wanless D., White O., Wortman J., Fraser C.M., El-Sayed N.M.A.
      Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: GUTat10.1Imported.
    5. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ57V35_TRYB2
    AccessioniPrimary (citable) accession number: Q57V35
    Secondary accession number(s): D6XK92
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 10, 2005
    Last sequence update: May 10, 2005
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3