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Q57V35

- Q57V35_TRYB2

UniProt

Q57V35 - Q57V35_TRYB2

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Protein
Submitted name:

60S ribosomal protein L7, putative

Gene

Tb927.7.1740

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: GeneDB_Tbrucei

GO - Biological processi

  1. ribosome biogenesis Source: GeneDB_Tbrucei
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinUniRule annotationImported

Names & Taxonomyi

Protein namesi
Submitted name:
60S ribosomal protein L7, putativeImported
Gene namesi
ORF Names:Tb927.7.1740Imported, Tb927.7.1750Imported
OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
Taxonomic identifieri185431 [NCBI]
Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
ProteomesiUP000008524: Chromosome 7

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: GeneDB_Tbrucei
Complete GO annotation...

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3ZF7electron microscopy5.57w1-257[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L30P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1841.
HOGENOMiHOG000170917.
KOiK02937.
OMAiVIHEIFT.

Family and domain databases

Gene3Di3.30.1390.20. 2 hits.
InterProiIPR018038. Ribosomal_L30_CS.
IPR016082. Ribosomal_L30_ferredoxin-like.
IPR012988. Ribosomal_L30_N.
IPR005998. Ribosomal_L7_euk.
[Graphical view]
PfamiPF00327. Ribosomal_L30. 1 hit.
PF08079. Ribosomal_L30_N. 1 hit.
[Graphical view]
SUPFAMiSSF55129. SSF55129. 1 hit.
TIGRFAMsiTIGR01310. L7. 1 hit.
PROSITEiPS00634. RIBOSOMAL_L30. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q57V35-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFMTGLILLG KGREVMPAKA VPAPESAIKR AAFKQQQTEN FKKAIAANKV
60 70 80 90 100
AAAALKKLAY SRGLKYSREY RSTEKKLAGL RRNARQHGNY YLEAKPKVAV
110 120 130 140 150
VTRIRGIAKV PPKQRKILQL LRLRQIFNTV FVRLNKPMEN MLRAVEPYIA
160 170 180 190 200
YGYPSLSTVR AMVYKRGHLK INGQRVKITD NQMIKDKYHN DDIVCAEDIV
210 220 230 240 250
NQIYACGKHF RTVTNGLWPF KLAPPAGGMR QKRRHFVEGG DYGNRDTLIN

RFLARMI
Length:257
Mass (Da):29,361
Last modified:May 10, 2005 - v1
Checksum:iE78D065B6E6DA7A6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC159447 Genomic DNA. Translation: AAX70533.1.
AC159447 Genomic DNA. Translation: AAX70534.1.
CP000070 Genomic DNA. Translation: AAZ12239.1.
CP000070 Genomic DNA. Translation: AAZ12240.1.
RefSeqiXP_845798.1. XM_840705.1.
XP_845799.1. XM_840706.1.

Genome annotation databases

GeneIDi3658383.
3658390.
KEGGitbr:Tb927.7.1740.
tbr:Tb927.7.1750.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC159447 Genomic DNA. Translation: AAX70533.1 .
AC159447 Genomic DNA. Translation: AAX70534.1 .
CP000070 Genomic DNA. Translation: AAZ12239.1 .
CP000070 Genomic DNA. Translation: AAZ12240.1 .
RefSeqi XP_845798.1. XM_840705.1.
XP_845799.1. XM_840706.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3ZF7 electron microscopy 5.57 w 1-257 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 3658383.
3658390.
KEGGi tbr:Tb927.7.1740.
tbr:Tb927.7.1750.

Phylogenomic databases

eggNOGi COG1841.
HOGENOMi HOG000170917.
KOi K02937.
OMAi VIHEIFT.

Family and domain databases

Gene3Di 3.30.1390.20. 2 hits.
InterProi IPR018038. Ribosomal_L30_CS.
IPR016082. Ribosomal_L30_ferredoxin-like.
IPR012988. Ribosomal_L30_N.
IPR005998. Ribosomal_L7_euk.
[Graphical view ]
Pfami PF00327. Ribosomal_L30. 1 hit.
PF08079. Ribosomal_L30_N. 1 hit.
[Graphical view ]
SUPFAMi SSF55129. SSF55129. 1 hit.
TIGRFAMsi TIGR01310. L7. 1 hit.
PROSITEi PS00634. RIBOSOMAL_L30. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 927/4 GUTat10.1Imported.
  2. "The genome of the African trypanosome Trypanosoma brucei."
    Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
    , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
    Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 927/4 GUTat10.1Imported.
  3. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GUTat10.1Imported.
  4. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
    Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
    Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

Entry informationi

Entry nameiQ57V35_TRYB2
AccessioniPrimary (citable) accession number: Q57V35
Secondary accession number(s): D6XK92
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: October 29, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3