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Q57U30

- Q57U30_TRYB2

UniProt

Q57U30 - Q57U30_TRYB2

Protein
Submitted name:

40S ribosomal protein S33, putative

Gene

Tb927.7.230

Organism
Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: GeneDB_Tbrucei

    GO - Biological processi

    1. translation Source: GeneDB_Tbrucei

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal proteinImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    40S ribosomal protein S33, putativeImported
    Gene namesi
    ORF Names:Tb927.7.230Imported, Tb927.7.240Imported
    OrganismiTrypanosoma brucei brucei (strain 927/4 GUTat10.1)Imported
    Taxonomic identifieri999953 [NCBI]
    Taxonomic lineageiEukaryotaEuglenozoaKinetoplastidaTrypanosomatidaeTrypanosoma
    ProteomesiUP000008524: Chromosome 7

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3ZEYelectron microscopy5.57Z1-103[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG2053.
    HOGENOMiHOG000224552.
    KOiK02979.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012340. NA-bd_OB-fold.
    IPR000289. Ribosomal_S28e.
    IPR028626. Ribosomal_S28e_CS.
    [Graphical view]
    PANTHERiPTHR10769. PTHR10769. 1 hit.
    PfamiPF01200. Ribosomal_S28e. 1 hit.
    [Graphical view]
    ProDomiPD005541. Ribosomal_S28e. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00961. RIBOSOMAL_S28E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q57U30-1 [UniParc]FASTAAdd to Basket

    « Hide

    MCSSVAMAEV ATAATTAATK KDKKAPQEEV VVQQTDQAQV GVIIKVLGRT    50
    GSRGNVTQVR VRLMAEEGSP EANRTIVRNV KGPCKEGDML SLMETEREAR 100
    RLR 103
    Length:103
    Mass (Da):11,170
    Last modified:May 10, 2005 - v1
    Checksum:i74093CF29FBF4A5B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC159458 Genomic DNA. Translation: AAX70887.1.
    AC159458 Genomic DNA. Translation: AAX70888.1.
    CP000070 Genomic DNA. Translation: AAZ12088.1.
    CP000070 Genomic DNA. Translation: AAZ12089.1.
    RefSeqiXP_845647.1. XM_840554.1.
    XP_845648.1. XM_840555.1.

    Genome annotation databases

    EnsemblProtistsiAAZ12088; AAZ12088; Tb927.7.230.
    AAZ12089; AAZ12089; Tb927.7.240.
    GeneIDi3658230.
    3658234.
    KEGGitbr:Tb927.7.230.
    tbr:Tb927.7.240.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC159458 Genomic DNA. Translation: AAX70887.1 .
    AC159458 Genomic DNA. Translation: AAX70888.1 .
    CP000070 Genomic DNA. Translation: AAZ12088.1 .
    CP000070 Genomic DNA. Translation: AAZ12089.1 .
    RefSeqi XP_845647.1. XM_840554.1.
    XP_845648.1. XM_840555.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3ZEY electron microscopy 5.57 Z 1-103 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi AAZ12088 ; AAZ12088 ; Tb927.7.230 .
    AAZ12089 ; AAZ12089 ; Tb927.7.240 .
    GeneIDi 3658230.
    3658234.
    KEGGi tbr:Tb927.7.230.
    tbr:Tb927.7.240.

    Phylogenomic databases

    eggNOGi COG2053.
    HOGENOMi HOG000224552.
    KOi K02979.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012340. NA-bd_OB-fold.
    IPR000289. Ribosomal_S28e.
    IPR028626. Ribosomal_S28e_CS.
    [Graphical view ]
    PANTHERi PTHR10769. PTHR10769. 1 hit.
    Pfami PF01200. Ribosomal_S28e. 1 hit.
    [Graphical view ]
    ProDomi PD005541. Ribosomal_S28e. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00961. RIBOSOMAL_S28E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    2. "The genome of the African trypanosome Trypanosoma brucei."
      Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., Bohme U., Hannick L., Aslett M.A., Shallom J., Marcello L., Hou L., Wickstead B., Alsmark U.C.M.
      , Arrowsmith C., Atkin R.J., Barron A.J., Bringaud F., Brooks K., Carrington M., Cherevach I., Chillingworth T.J., Churcher C., Clark L.N., Corton C.H., Cronin A., Davies R.M., Doggett J., Djikeng A., Feldblyum T., Field M.C., Fraser A., Goodhead I., Hance Z., Harper D., Harris B.R., Hauser H., Hostetler J., Ivens A., Jagels K., Johnson D., Johnson J., Jones K., Kerhornou A.X., Koo H., Larke N., Landfear S., Larkin C., Leech V., Line A., Lord A., Macleod A., Mooney P.J., Moule S., Martin D.M., Morgan G.W., Mungall K., Norbertczak H., Ormond D., Pai G., Peacock C.S., Peterson J., Quail M.A., Rabbinowitsch E., Rajandream M.A., Reitter C., Salzberg S.L., Sanders M., Schobel S., Sharp S., Simmonds M., Simpson A.J., Tallon L., Turner C.M., Tait A., Tivey A.R., Van Aken S., Walker D., Wanless D., Wang S., White B., White O., Whitehead S., Woodward J., Wortman J., Adams M.D., Embley T.M., Gull K., Ullu E., Barry J.D., Fairlamb A.H., Opperdoes F., Barrell B.G., Donelson J.E., Hall N., Fraser C.M., Melville S.E., El-Sayed N.M.A.
      Science 309:416-422(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 927/4 GUTat10.1Imported.
    3. "Sequencing, closure, and annotation of Trypanosoma brucei chromosomes 2 through 8."
      Ghedin E., Blandin G., Bartholomeu D., Caler E., Haas B., Hannick L., Shallom J., Hou L., Djikeng A., Feldblyum T., Hostetler J., Johnson J., Jones K., Koo H.L., Larkin C., Pai G., Peterson J., Khalak H.G.
      , Salzberg S., Simpson A.J., Tallon L., Van Aken S., Wanless D., White O., Wortman J., Fraser C.M., El-Sayed N.M.A.
      Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 927/4 GUTat10.1Imported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: GUTat10.1Imported.
    5. "High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome."
      Hashem Y., des Georges A., Fu J., Buss S.N., Jossinet F., Jobe A., Zhang Q., Liao H.Y., Grassucci R.A., Bajaj C., Westhof E., Madison-Antenucci S., Frank J.
      Nature 494:385-389(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: STRUCTURE BY ELECTRON MICROSCOPY (5.57 ANGSTROMS).

    Entry informationi

    Entry nameiQ57U30_TRYB2
    AccessioniPrimary (citable) accession number: Q57U30
    Secondary accession number(s): D6XJU1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 10, 2005
    Last sequence update: May 10, 2005
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3