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Protein
Submitted name:

Secretion system apparatus SsaC

Gene

ssaC

Organism
Salmonella choleraesuis (strain SC-B67)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciSENT321314:GJCS-1477-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Secretion system apparatus SsaCImported
Gene namesi
Name:ssaCImported
Ordered Locus Names:SCH_1415Imported
OrganismiSalmonella choleraesuis (strain SC-B67)Imported
Taxonomic identifieri321314 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000000538 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini177 – 26791Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Phylogenomic databases

KOiK03219.
OMAiNAVIVHD.
OrthoDBiEOG6423BN.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q57PP0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVVNKRLILI LLFILNTVKS DELSWKGNDF TLYARQMPLA EVLHLLSENY
60 70 80 90 100
DTAITISPLI TATFSGKIPP GPPVDILNNL AAQYDLLTWF DGSMLYVYPA
110 120 130 140 150
SLLKHQVITF NILSTGRFIH YLRSQNILSS PGCEVKEITG TRAVEVSGVP
160 170 180 190 200
SCLTRISQLA SVLDNALIKR KDSAVSVSIY TLKYATAMDT QYQYRDQSVV
210 220 230 240 250
VPGVVSVLRE MSKTSVPASS TTNGSPATQA LPMFAADPRQ NAVIVRDYAA
260 270 280 290 300
NMAGYRKLIT ELDQRQQMIE ISVKIIDVNA GDINQLGIDW GTAVSLGGKK
310 320 330 340 350
IAFNTGLNDG GASGFSTVIS DTSNFMVRLN ALEKSSQAYV LSQPSVVTLN
360 370 380 390 400
NIQAVLDKNI TFYTKLQGEK VAKLESITTG SLLRVTPRLL NDNGTQKIML
410 420 430 440 450
NLNIQDGQQS DTQSETDPLP EVQNSEIASQ ATLLAGQSLL LGGFKQGKQI
460 470 480 490
HSQNKIPLLG DIPVVGHLFR NDTTQVHSVI RLFLIKASVV NNGISHG
Length:497
Mass (Da):54,126
Last modified:May 10, 2005 - v1
Checksum:i6DB4DEABD33236E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017220 Genomic DNA. Translation: AAX65321.1.
RefSeqiWP_000261292.1. NC_006905.1.

Genome annotation databases

EnsemblBacteriaiAAX65321; AAX65321; SCH_1415.
KEGGisec:SCH_1415.
PATRICi32323586. VBISalEnt136302_1787.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017220 Genomic DNA. Translation: AAX65321.1.
RefSeqiWP_000261292.1. NC_006905.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAX65321; AAX65321; SCH_1415.
KEGGisec:SCH_1415.
PATRICi32323586. VBISalEnt136302_1787.

Phylogenomic databases

KOiK03219.
OMAiNAVIVHD.
OrthoDBiEOG6423BN.

Enzyme and pathway databases

BioCyciSENT321314:GJCS-1477-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Salmonella enterica serovar Choleraesuis, a highly invasive and resistant zoonotic pathogen."
    Chiu C.H., Tang P., Chu C., Hu S., Bao Q., Yu J., Chou Y.Y., Wang H.S., Lee Y.S.
    Nucleic Acids Res. 33:1690-1698(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SC-B67Imported.

Entry informationi

Entry nameiQ57PP0_SALCH
AccessioniPrimary (citable) accession number: Q57PP0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: May 11, 2016
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.