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Q57D06

- KDSA_BRUAB

UniProt

Q57D06 - KDSA_BRUAB

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Protein

2-dehydro-3-deoxyphosphooctonate aldolase

Gene

kdsA

Organism
Brucella abortus biovar 1 (strain 9-941)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Phosphoenolpyruvate + D-arabinose 5-phosphate + H2O = 2-dehydro-3-deoxy-D-octonate 8-phosphate + phosphate.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. 3-deoxy-8-phosphooctulonate synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. keto-3-deoxy-D-manno-octulosonic acid biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Transferase

Keywords - Biological processi

Lipopolysaccharide biosynthesis

Enzyme and pathway databases

BioCyciBABO262698:GJC2-1161-MONOMER.
UniPathwayiUPA00030.
UPA00357; UER00474.

Names & Taxonomyi

Protein namesi
Recommended name:
2-dehydro-3-deoxyphosphooctonate aldolaseUniRule annotation (EC:2.5.1.55UniRule annotation)
Alternative name(s):
3-deoxy-D-manno-octulosonic acid 8-phosphate synthaseUniRule annotation
KDO-8-phosphate synthaseUniRule annotation
Short name:
KDO 8-P synthaseUniRule annotation
Short name:
KDOPSUniRule annotation
Phospho-2-dehydro-3-deoxyoctonate aldolaseUniRule annotation
Gene namesi
Name:kdsAUniRule annotation
Ordered Locus Names:BruAb1_1139
OrganismiBrucella abortus biovar 1 (strain 9-941)
Taxonomic identifieri262698 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000000540: Chromosome I

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 2772772-dehydro-3-deoxyphosphooctonate aldolasePRO_0000304435Add
BLAST

Proteomic databases

PRIDEiQ57D06.

Interactioni

Protein-protein interaction databases

STRINGi262698.BruAb1_1139.

Structurei

3D structure databases

ProteinModelPortaliQ57D06.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the KdsA family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2877.
HOGENOMiHOG000023021.
KOiK01627.
OMAiMESREHA.
OrthoDBiEOG680X4R.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
HAMAPiMF_00056. KDO8P_synth.
InterProiIPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view]
PANTHERiPTHR21057:SF2. PTHR21057:SF2. 1 hit.
PfamiPF00793. DAHP_synth_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01362. KDO8P_synth. 1 hit.

Sequencei

Sequence statusi: Complete.

Q57D06-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVTANSTVKV GNVTFSNSAP LALIAGPCQM ETRDHAFEMA GRLKEMTDKL
60 70 80 90 100
GIGLVYKSSF DKANRTSLKA ARGIGLEKAL EVFSDLKKEY GFPVLTDIHT
110 120 130 140 150
EEQCAAVAPV VDVLQIPAFL CRQTDLLIAA ARTGRVVNVK KGQFLAPWDM
160 170 180 190 200
KNVLAKITES GNPNVLATER GVSFGYNTLV SDMRALPIMA GLGAPVIFDA
210 220 230 240 250
THSVQQPGGQ GGSTGGQREF VETLARAAVA VGVAGFFIET HEDPDNAPSD
260 270
GPNMVPIDKM PALLEKLMAF DRIAKAL
Length:277
Mass (Da):29,532
Last modified:May 10, 2005 - v1
Checksum:i1C754D90382F0DD8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017223 Genomic DNA. Translation: AAX74478.1.
RefSeqiYP_221839.1. NC_006932.1.

Genome annotation databases

EnsemblBacteriaiAAX74478; AAX74478; BruAb1_1139.
GeneIDi3341149.
KEGGibmb:BruAb1_1139.
PATRICi17823968. VBIBruAbo15061_1206.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017223 Genomic DNA. Translation: AAX74478.1 .
RefSeqi YP_221839.1. NC_006932.1.

3D structure databases

ProteinModelPortali Q57D06.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262698.BruAb1_1139.

Proteomic databases

PRIDEi Q57D06.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAX74478 ; AAX74478 ; BruAb1_1139 .
GeneIDi 3341149.
KEGGi bmb:BruAb1_1139.
PATRICi 17823968. VBIBruAbo15061_1206.

Phylogenomic databases

eggNOGi COG2877.
HOGENOMi HOG000023021.
KOi K01627.
OMAi MESREHA.
OrthoDBi EOG680X4R.

Enzyme and pathway databases

UniPathwayi UPA00030 .
UPA00357 ; UER00474 .
BioCyci BABO262698:GJC2-1161-MONOMER.

Family and domain databases

Gene3Di 3.20.20.70. 1 hit.
HAMAPi MF_00056. KDO8P_synth.
InterProi IPR013785. Aldolase_TIM.
IPR006218. DAHP1/KDSA.
IPR006269. KDO8P_synthase.
[Graphical view ]
PANTHERi PTHR21057:SF2. PTHR21057:SF2. 1 hit.
Pfami PF00793. DAHP_synth_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR01362. KDO8P_synth. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Completion of the genome sequence of Brucella abortus and comparison to the highly similar genomes of Brucella melitensis and Brucella suis."
    Halling S.M., Peterson-Burch B.D., Bricker B.J., Zuerner R.L., Qing Z., Li L.-L., Kapur V., Alt D.P., Olsen S.C.
    J. Bacteriol. 187:2715-2726(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 9-941.

Entry informationi

Entry nameiKDSA_BRUAB
AccessioniPrimary (citable) accession number: Q57D06
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: May 10, 2005
Last modified: October 29, 2014
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella abortus strain 9-941
    Brucella abortus (strain 9-941): entries and gene names
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3