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Q57CP5 (RL1_BRUAB) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L1
Gene names
Name:rplA
Ordered Locus Names:BruAb1_1251
OrganismBrucella abortus biovar 1 (strain 9-941) [Complete proteome] [HAMAP]
Taxonomic identifier262698 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length233 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release By similarity. HAMAP-Rule MF_01318

Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA By similarity. HAMAP-Rule MF_01318

Subunit structure

Part of the 50S ribosomal subunit By similarity. HAMAP-Rule MF_01318

Sequence similarities

Belongs to the ribosomal protein L1P family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 23323350S ribosomal protein L1 HAMAP-Rule MF_01318
PRO_0000230593

Sequences

Sequence LengthMass (Da)Tools
Q57CP5 [UniParc].

Last modified May 10, 2005. Version 1.
Checksum: 3E14C01670D71596

FASTA23324,611
        10         20         30         40         50         60 
MAKISKRINK IREGVDRNKL YDLSAAIGLV KERAVAKFDE TVEIAMNLGV DPRHADQMVR 

        70         80         90        100        110        120 
GVVNLPNGTG RTVRVAVFAR GDKAEEAKKA GADIVGAEEL FEIVNGGKIE FDRCIATPDM 

       130        140        150        160        170        180 
MPLVGRLGKV LGPRGMMPNP KVGTVTTDVA AAVAASKGGA VEFRVEKAGI IHAGIGKVSF 

       190        200        210        220        230 
DNAKLEENIK AFADAVIKAK PSAAKGEYVK RVSISSTMGV GVKVDPSTVK VVD 

« Hide

References

[1]"Completion of the genome sequence of Brucella abortus and comparison to the highly similar genomes of Brucella melitensis and Brucella suis."
Halling S.M., Peterson-Burch B.D., Bricker B.J., Zuerner R.L., Qing Z., Li L.-L., Kapur V., Alt D.P., Olsen S.C.
J. Bacteriol. 187:2715-2726(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 9-941.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017223 Genomic DNA. Translation: AAX74589.1.
RefSeqYP_221950.1. NC_006932.1.

3D structure databases

ProteinModelPortalQ57CP5.
SMRQ57CP5. Positions 6-227.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING262698.BruAb1_1251.

Proteomic databases

PRIDEQ57CP5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAX74589; AAX74589; BruAb1_1251.
GeneID3340093.
KEGGbmb:BruAb1_1251.
PATRIC17824194. VBIBruAbo15061_1319.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0081.
HOGENOMHOG000207015.
KOK02863.
OMAIRINIRE.
OrthoDBEOG6FBX2G.

Enzyme and pathway databases

BioCycBABO262698:GJC2-1273-MONOMER.

Family and domain databases

Gene3D3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
HAMAPMF_01318_B. Ribosomal_L1_B.
InterProIPR005878. Ribosom_L1_bac-type.
IPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023673. Ribosomal_L1_CS.
[Graphical view]
PfamPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
PIRSFPIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMSSF56808. SSF56808. 1 hit.
TIGRFAMsTIGR01169. rplA_bact. 1 hit.
PROSITEPS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL1_BRUAB
AccessionPrimary (citable) accession number: Q57CP5
Entry history
Integrated into UniProtKB/Swiss-Prot: April 4, 2006
Last sequence update: May 10, 2005
Last modified: May 14, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

Brucella abortus strain 9-941

Brucella abortus (strain 9-941): entries and gene names