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Q57BW7

- HEM6_BRUAB

UniProt

Q57BW7 - HEM6_BRUAB

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Protein

Oxygen-dependent coproporphyrinogen-III oxidase

Gene
hemF, BruAb1_1539
Organism
Brucella abortus biovar 1 (strain 9-941)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX By similarity.UniRule annotation

Catalytic activityi

Coproporphyrinogen-III + O2 + 2 H+ = protoporphyrinogen-IX + 2 CO2 + 2 H2O.UniRule annotation

Cofactori

Divalent cations By similarity.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei116 – 1161Substrate By similarity
Metal bindingi120 – 1201Divalent cation By similarity
Active sitei130 – 1301Proton donor By similarity
Metal bindingi130 – 1301Divalent cation By similarity
Metal bindingi168 – 1681Divalent cation By similarity
Metal bindingi199 – 1991Divalent cation By similarity
Sitei199 – 1991Important for dimerization By similarity

GO - Molecular functioni

  1. coproporphyrinogen oxidase activity Source: UniProtKB-HAMAP
  2. metal ion binding Source: UniProtKB-KW
  3. protein homodimerization activity Source: UniProtKB

GO - Biological processi

  1. protoporphyrinogen IX biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Biological processi

Heme biosynthesis, Porphyrin biosynthesis

Keywords - Ligandi

Metal-binding

Enzyme and pathway databases

BioCyciBABO262698:GJC2-1570-MONOMER.
UniPathwayiUPA00251; UER00322.

Names & Taxonomyi

Protein namesi
Recommended name:
Oxygen-dependent coproporphyrinogen-III oxidase (EC:1.3.3.3)
Short name:
CPO
Short name:
Coprogen oxidase
Short name:
Coproporphyrinogenase
Gene namesi
Name:hemF
Ordered Locus Names:BruAb1_1539
OrganismiBrucella abortus biovar 1 (strain 9-941)
Taxonomic identifieri262698 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000000540: Chromosome I

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 303303Oxygen-dependent coproporphyrinogen-III oxidaseUniRule annotationPRO_1000119788Add
BLAST

Interactioni

Subunit structurei

Homodimer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi262698.BruAb1_1539.

Structurei

3D structure databases

ProteinModelPortaliQ57BW7.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni132 – 1343Substrate binding By similarity
Regioni268 – 30336Important for dimerization By similarityAdd
BLAST
Regioni286 – 2883Substrate binding By similarity

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0408.
HOGENOMiHOG000262768.
KOiK00228.
OMAiEDTAHFH.
OrthoDBiEOG67T5GJ.

Family and domain databases

Gene3Di3.40.1500.10. 1 hit.
HAMAPiMF_00333. Coprogen_oxidas.
InterProiIPR001260. Coprogen_oxidase_aer.
IPR018375. Coprogen_oxidase_CS.
[Graphical view]
PANTHERiPTHR10755. PTHR10755. 1 hit.
PfamiPF01218. Coprogen_oxidas. 1 hit.
[Graphical view]
PIRSFiPIRSF000166. Coproporphyri_ox. 1 hit.
PRINTSiPR00073. COPRGNOXDASE.
SUPFAMiSSF102886. SSF102886. 1 hit.
PROSITEiPS01021. COPROGEN_OXIDASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q57BW7-1 [UniParc]FASTAAdd to Basket

« Hide

MKREDIPAII PADIEEKKKA AQSWFEELRD RICASYEQLE DELQGPLSDR    50
EPGRFVRTPW QKDDGNGGGV MSIMHGRVFE KVGVHVSTVH GEFSPEFRKQ 100
IPGAEEDPRY WASGISLIAH PQNPNVPAVH MNTRMIVTTR QWFAGGADLT 150
PVLDRRRTQE DPDTLAFHKA FRFICEKHKD IVDYQRLKEW CDEYFFLPHR 200
DEPRGIGGIF YDWLHSPEEK GGWDSDFAFT RDVGRGFSVV YPHLVRQNFN 250
KDWTEADRDE QLIRRGRYVE FNLLYDRGTI FGLKTGGNMN AILSSMPPVV 300
KWP 303
Length:303
Mass (Da):35,111
Last modified:May 10, 2005 - v1
Checksum:i65C4C1B754D13CE0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017223 Genomic DNA. Translation: AAX74867.1.
RefSeqiYP_222228.1. NC_006932.1.

Genome annotation databases

EnsemblBacteriaiAAX74867; AAX74867; BruAb1_1539.
GeneIDi3341076.
KEGGibmb:BruAb1_1539.
PATRICi17824828. VBIBruAbo15061_1628.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE017223 Genomic DNA. Translation: AAX74867.1 .
RefSeqi YP_222228.1. NC_006932.1.

3D structure databases

ProteinModelPortali Q57BW7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 262698.BruAb1_1539.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAX74867 ; AAX74867 ; BruAb1_1539 .
GeneIDi 3341076.
KEGGi bmb:BruAb1_1539.
PATRICi 17824828. VBIBruAbo15061_1628.

Phylogenomic databases

eggNOGi COG0408.
HOGENOMi HOG000262768.
KOi K00228.
OMAi EDTAHFH.
OrthoDBi EOG67T5GJ.

Enzyme and pathway databases

UniPathwayi UPA00251 ; UER00322 .
BioCyci BABO262698:GJC2-1570-MONOMER.

Family and domain databases

Gene3Di 3.40.1500.10. 1 hit.
HAMAPi MF_00333. Coprogen_oxidas.
InterProi IPR001260. Coprogen_oxidase_aer.
IPR018375. Coprogen_oxidase_CS.
[Graphical view ]
PANTHERi PTHR10755. PTHR10755. 1 hit.
Pfami PF01218. Coprogen_oxidas. 1 hit.
[Graphical view ]
PIRSFi PIRSF000166. Coproporphyri_ox. 1 hit.
PRINTSi PR00073. COPRGNOXDASE.
SUPFAMi SSF102886. SSF102886. 1 hit.
PROSITEi PS01021. COPROGEN_OXIDASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Completion of the genome sequence of Brucella abortus and comparison to the highly similar genomes of Brucella melitensis and Brucella suis."
    Halling S.M., Peterson-Burch B.D., Bricker B.J., Zuerner R.L., Qing Z., Li L.-L., Kapur V., Alt D.P., Olsen S.C.
    J. Bacteriol. 187:2715-2726(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 9-941.

Entry informationi

Entry nameiHEM6_BRUAB
AccessioniPrimary (citable) accession number: Q57BW7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: May 10, 2005
Last modified: June 11, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella abortus strain 9-941
    Brucella abortus (strain 9-941): entries and gene names
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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