RIO-type serine/threonine-protein kinase Rio1 - Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

Preferred order of sections

Names and origin

Protein names

Recommended name:
RIO-type serine/threonine-protein kinase Rio1
EC=2.7.11.1

Gene names

Name:	rio1
Ordered Locus Names:	MJ0444

Organism

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) [Reference proteome] [HAMAP]

Taxonomic identifier

243232 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus ›

Protein attributes

Sequence length	290 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity

ATP + a protein = ADP + a phosphoprotein.

Sequence similarities

Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.

Contains 1 protein kinase domain.

Ontologies

Keywords
Ligand	ATP-binding Magnesium Metal-binding Nucleotide-binding
Molecular function	Kinase Serine/threonine-protein kinase Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW protein serine/threonine kinase activity Inferred from electronic annotation. Source: UniProtKB-KW protein tyrosine kinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Chain

1 – 290

290

RIO-type serine/threonine-protein kinase Rio1

PRO_0000213534

Regions

Domain

76 – 290

215

Protein kinase

Nucleotide binding

82 – 90

9

ATP Potential

Sites

Active site

214

1

Proton acceptor By similarity

Metal binding

219

1

Magnesium By similarity

Metal binding

231

1

Magnesium By similarity

Binding site

103

1

ATP By similarity

Binding site

219

1

ATP By similarity

Binding site

231

1

ATP By similarity

Sequences

Sequence

Length

Mass (Da)

Tools

Q57886 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 52A8045266B2ACAB
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FASTA

290

34,469

        10         20         30         40         50         60 
MSCYKVMPIA KNIDDELYEL NKLLSEKEEF QLDREYQKEI LEKERKFLED LKTANEVFDK 

        70         80         90        100        110        120 
RTLMTLFSLL AGKHLTEYIG IVNSGKEAVV FKARKGKFYR AVKVYRVATC DFKTMSKYIQ 

       130        140        150        160        170        180 
GDPRFHLRKS SRRQIIHAWV EKEFRNLRRA SEIINAPKAR LRRENVLVMD FVGYRGIPAP 

       190        200        210        220        230        240 
KLKDMQDLDW EKYFKIIKES MKKLYEEGEL VHGDLSEYNI LVKDDEPVFI DFSQSVITQH 

       250        260        270        280        290 
PLAHPLLIRD CINICNFFRR KRVDCNYKDL YKYITGKEID PIDEAMIKQL

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References

[1]

"Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii."
Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G.

Venter J.C.
Science 273:1058-1073(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

Cross-references

Sequence databases
EMBL GenBank DDBJ	L77117 Genomic DNA. Translation: AAB98431.1.
PIR	D64355.
RefSeq	NP_247418.1. NC_000909.1.
3D structure databases
ProteinModelPortal	Q57886.
ModBase	Search...
Protein-protein interaction databases
STRING	243232.MJ0444.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAB98431; AAB98431; MJ_0444.
GeneID	1451304.
KEGG	mja:MJ_0444.
Phylogenomic databases
eggNOG	COG1718.
KO	K07178.
OMA	YIQGDPR.
ProtClustDB	CLSK876191.
Family and domain databases
InterPro	IPR011009. Kinase-like_dom. IPR000719. Prot_kinase_cat_dom. IPR018934. RIO-like_kinase. IPR000687. RIO_kinase. IPR018935. RIO_kinase_CS. IPR008266. Tyr_kinase_AS. [Graphical view]
Pfam	PF01163. RIO1. 1 hit. [Graphical view]
SMART	SM00090. RIO. 1 hit. [Graphical view]
SUPFAM	SSF56112. Kinase_like. 1 hit.
PROSITE	PS50011. PROTEIN_KINASE_DOM. 1 hit. PS01245. RIO1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RIO1_METJA

Accession

Primary (citable) accession number: Q57886

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
Last sequence update:	November 1, 1997
Last modified:	May 1, 2013
This is version 75 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program

Relevant documents

Methanococcus jannaschii

Methanococcus jannaschii: entries and gene names

SIMILARITY comments

Index of protein domains and families

Preferred order of sections

Names and origin

Protein attributes

General annotation (Comments)

Ontologies

Sequence annotation (Features)

Molecule processing

Regions

Sites

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry information

Relevant documents