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Q57832 (RPOL_METJA) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 86. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Interactions·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
DNA-directed RNA polymerase subunit L

EC=2.7.7.6
Gene names
Name:rpoL
Ordered Locus Names:MJ0387
OrganismMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) [Reference proteome] [HAMAP]
Taxonomic identifier243232 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus

Protein attributes

Sequence length99 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates By similarity. HAMAP-Rule MF_00261

Catalytic activity

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). HAMAP-Rule MF_00261

Sequence similarities

Belongs to the archaeal RpoL/eukaryotic RPB11/RPC19 RNA polymerase subunit family.

Ontologies

Keywords
   Biological processTranscription
   Cellular componentDNA-directed RNA polymerase
   Molecular functionNucleotidyltransferase
Transferase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranscription, DNA-templated

Inferred from electronic annotation. Source: InterPro

   Cellular_componentDNA-directed RNA polymerase complex

Inferred from Biological aspect of Ancestor. Source: RefGenome

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

DNA-directed RNA polymerase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Binary interactions

With

Entry

#Exp.

IntAct

Notes

rpoDQ576483EBI-2567038,EBI-2567023

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 9999DNA-directed RNA polymerase subunit L HAMAP-Rule MF_00261
PRO_0000149326

Sequences

Sequence LengthMass (Da)Tools
Q57832 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 0C25307DDF5EE909

FASTA9911,392
        10         20         30         40         50         60 
MEIKILERKD NLVEIELINE DHSLPNLLKD ILLTKEGVKM ASYSIDHPLL HPETGRYISN 

        70         80         90 
PKITIITEEG TDPLEVLKEG LRDIIKMCDT LLDELKEKK 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L77117 Genomic DNA. Translation: AAB98373.1.
PIRC64348.
RefSeqNP_247361.1. NC_000909.1.

3D structure databases

ProteinModelPortalQ57832.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ57832. 1 interaction.
STRING243232.MJ0387.

Proteomic databases

PRIDEQ57832.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAB98373; AAB98373; MJ_0387.
GeneID1451244.
KEGGmja:MJ_0387.

Phylogenomic databases

eggNOGCOG1761.
KOK03056.
OMAMELRVID.
ProtClustDBPRK01146.

Family and domain databases

HAMAPMF_00261. RNApol_arch_L.
InterProIPR009025. RBP11-like_dimer.
IPR008193. RNA_pol_Rpb11_13-16kDa_CS.
IPR022905. RNAP_L.
[Graphical view]
SUPFAMSSF55257. SSF55257. 1 hit.
PROSITEPS01154. RNA_POL_L_13KD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRPOL_METJA
AccessionPrimary (citable) accession number: Q57832
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: February 19, 2014
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Methanococcus jannaschii

Methanococcus jannaschii: entries and gene names