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Q57832

- RPOL_METJA

UniProt

Q57832 - RPOL_METJA

Protein

DNA-directed RNA polymerase subunit L

Gene

rpoL

Organism
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 90 (01 Oct 2014)
      Sequence version 1 (01 Nov 1997)
      Previous versions | rss
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    Functioni

    DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.By similarity

    Catalytic activityi

    Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. DNA-directed RNA polymerase activity Source: UniProtKB-KW
    3. protein binding Source: IntAct

    GO - Biological processi

    1. transcription, DNA-templated Source: InterPro

    Keywords - Molecular functioni

    Nucleotidyltransferase, Transferase

    Keywords - Biological processi

    Transcription

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
    Gene namesi
    Name:rpoL
    Ordered Locus Names:MJ0387
    OrganismiMethanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)
    Taxonomic identifieri243232 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
    ProteomesiUP000000805: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. DNA-directed RNA polymerase complex Source: RefGenome

    Keywords - Cellular componenti

    DNA-directed RNA polymerase

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 9999DNA-directed RNA polymerase subunit LPRO_0000149326Add
    BLAST

    Proteomic databases

    PRIDEiQ57832.

    Interactioni

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    rpoDQ576483EBI-2567038,EBI-2567023

    Protein-protein interaction databases

    IntActiQ57832. 1 interaction.
    STRINGi243232.MJ0387.

    Structurei

    3D structure databases

    ProteinModelPortaliQ57832.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG1761.
    KOiK03056.
    OMAiKVATYDI.
    PhylomeDBiQ57832.

    Family and domain databases

    HAMAPiMF_00261. RNApol_arch_L.
    InterProiIPR009025. RBP11-like_dimer.
    IPR008193. RNA_pol_Rpb11_13-16kDa_CS.
    IPR022905. RNAP_L.
    [Graphical view]
    SUPFAMiSSF55257. SSF55257. 1 hit.
    PROSITEiPS01154. RNA_POL_L_13KD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q57832-1 [UniParc]FASTAAdd to Basket

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    MEIKILERKD NLVEIELINE DHSLPNLLKD ILLTKEGVKM ASYSIDHPLL   50
    HPETGRYISN PKITIITEEG TDPLEVLKEG LRDIIKMCDT LLDELKEKK 99
    Length:99
    Mass (Da):11,392
    Last modified:November 1, 1997 - v1
    Checksum:i0C25307DDF5EE909
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L77117 Genomic DNA. Translation: AAB98373.1.
    PIRiC64348.
    RefSeqiNP_247361.1. NC_000909.1.

    Genome annotation databases

    EnsemblBacteriaiAAB98373; AAB98373; MJ_0387.
    GeneIDi1451244.
    KEGGimja:MJ_0387.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L77117 Genomic DNA. Translation: AAB98373.1 .
    PIRi C64348.
    RefSeqi NP_247361.1. NC_000909.1.

    3D structure databases

    ProteinModelPortali Q57832.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q57832. 1 interaction.
    STRINGi 243232.MJ0387.

    Proteomic databases

    PRIDEi Q57832.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAB98373 ; AAB98373 ; MJ_0387 .
    GeneIDi 1451244.
    KEGGi mja:MJ_0387.

    Phylogenomic databases

    eggNOGi COG1761.
    KOi K03056.
    OMAi KVATYDI.
    PhylomeDBi Q57832.

    Family and domain databases

    HAMAPi MF_00261. RNApol_arch_L.
    InterProi IPR009025. RBP11-like_dimer.
    IPR008193. RNA_pol_Rpb11_13-16kDa_CS.
    IPR022905. RNAP_L.
    [Graphical view ]
    SUPFAMi SSF55257. SSF55257. 1 hit.
    PROSITEi PS01154. RNA_POL_L_13KD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

    Entry informationi

    Entry nameiRPOL_METJA
    AccessioniPrimary (citable) accession number: Q57832
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 1, 1997
    Last sequence update: November 1, 1997
    Last modified: October 1, 2014
    This is version 90 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Methanococcus jannaschii
      Methanococcus jannaschii: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3