Q57713 (FER9_METJA) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized ferredoxin MJ0265

Gene names

Ordered Locus Names:

MJ0265

Organism

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii)

Taxonomic identifier

243232 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus

Protein attributes

Sequence length	166 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Binds 4 4Fe-4S clusters By similarity.
Sequence similarities	Contains 3 4Fe-4S ferredoxin-type domains.

Ontologies

Keywords
Biological process	Electron transport Transport
Domain	Repeat
Ligand	4Fe-4S Iron Iron-sulfur Metal-binding
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	electron transport chain Inferred from electronic annotation. Source: UniProtKB-KW transport Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	4 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: UniProtKB-KW electron carrier activity Inferred from electronic annotation. Source: InterPro metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 166	166	Uncharacterized ferredoxin MJ0265		PRO_0000159137
Regions
	Domain	3 – 33	31	4Fe-4S ferredoxin-type 1
	Domain	37 – 67	31	4Fe-4S ferredoxin-type 2
	Domain	68 – 97	30	4Fe-4S ferredoxin-type 3
Sites
	Metal binding	13	1	Iron-sulfur 1 (4Fe-4S) By similarity
	Metal binding	16	1	Iron-sulfur 1 (4Fe-4S) By similarity
	Metal binding	19	1	Iron-sulfur 1 (4Fe-4S) By similarity
	Metal binding	23	1	Iron-sulfur 2 (4Fe-4S) By similarity
	Metal binding	46	1	Iron-sulfur 3 (4Fe-4S) By similarity
	Metal binding	49	1	Iron-sulfur 3 (4Fe-4S) By similarity
	Metal binding	54	1	Iron-sulfur 3 (4Fe-4S) By similarity
	Metal binding	58	1	Iron-sulfur 4 (4Fe-4S) By similarity
	Metal binding	77	1	Iron-sulfur 4 (4Fe-4S) By similarity
	Metal binding	80	1	Iron-sulfur 4 (4Fe-4S) By similarity
	Metal binding	83	1	Iron-sulfur 4 (4Fe-4S) By similarity
	Metal binding	87	1	Iron-sulfur 3 (4Fe-4S) By similarity
	Metal binding	101	1	Iron-sulfur 2 (4Fe-4S) By similarity
	Metal binding	104	1	Iron-sulfur 2 (4Fe-4S) By similarity
	Metal binding	111	1	Iron-sulfur 2 (4Fe-4S) By similarity
	Metal binding	115	1	Iron-sulfur 1 (4Fe-4S) By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q57713 [UniParc]. Last modified June 1, 1998. Version 2. Checksum: 9173A1857002D7F6	FASTA	166	18,229
	10 20 30 40 50 60 MVMKKIIMTN FNCDNCGDCV KACMEKNKVG RIAIMEKDGK YIPIVCQHCA SAPCKEVCPV 70 80 90 100 110 120 SAIEHKDGYV YLNEDVCIGC GLCALACPFG AILMEDKAYK CILCNGDEPA CVKACSKRCL 130 140 150 160 ELVDVNELIF AKRDKSLDLF SKMSLPTQKS DNSLISKITI DAKVKP

References

[1]

"Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii." Bult C.J., White O., Olsen G.J., Zhou L., Fleischmann R.D., Sutton G.G., Blake J.A., FitzGerald L.M., Clayton R.A., Gocayne J.D., Kerlavage A.R., Dougherty B.A., Tomb J.-F., Adams M.D., Reich C.I., Overbeek R., Kirkness E.F., Weinstock K.G. , Merrick J.M., Glodek A., Scott J.L., Geoghagen N.S.M., Weidman J.F., Fuhrmann J.L., Nguyen D., Utterback T.R., Kelley J.M., Peterson J.D., Sadow P.W., Hanna M.C., Cotton M.D., Roberts K.M., Hurst M.A., Kaine B.P., Borodovsky M., Klenk H.-P., Fraser C.M., Smith H.O., Woese C.R., Venter J.C. Science 273:1058-1073(1996) [PubMed: 8688087] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	L77117 Genomic DNA. Translation: AAB98252.1.
RefSeq	NP_247237.1. NC_000909.1.
3D structure databases
ProteinModelPortal	Q57713.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1451119.
GenomeReviews	Gene locus MJ0265 in contig L77117_GR.
KEGG	mja:MJ_0265.
NMPDR	fig|243232.1.peg.274.
TIGR	MJ0265.
Phylogenomic databases
HOGENOM	HBG726839.
OMA	SCAMDAN.
ProtClustDB	CLSK876136.
Enzyme and pathway databases
BioCyc	MJAN243232:MJ_0265-MONOMER.
Family and domain databases
InterPro	IPR001450. 4Fe4S-bd_dom. IPR017896. 4Fe4S_Fe-S-bd. IPR017900. 4Fe4S_Fe_S_CS. [Graphical view]
KO	K00196.
Pfam	PF00037. Fer4. 1 hit. PF12798. Fer4_3. 1 hit. [Graphical view]
PROSITE	PS00198. 4FE4S_FER_1. 1 hit. PS51379. 4FE4S_FER_2. 3 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

FER9_METJA

Accession

Primary (citable) accession number: Q57713

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 26, 2003
Last sequence update:	June 1, 1998
Last modified:	November 16, 2011
This is version 71 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program