Reviewed,
UniProtKB/Swiss-Prot Q57471 (TRAM_RHIRD)
Last modified
November 24, 2009.
Version 48.
History...
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Transcriptional repressor traM | ||
| Gene names |
| ||
| Encoded on | Plasmid pTiA6NC | ||
| Organism | Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter) | ||
| Taxonomic identifier | 358 [NCBI] | ||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium |
Protein attributes
| Sequence length | 102 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Function | Negatively regulates conjugation and the expression of tra genes by antagonizing traR/AAI-dependent activation. TraM may either bind or modify traR or AAI making them unavailable. Alternatively, traM may bind tra promoters preventing traR activation. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Conjugation Transcription Transcription regulation |
| Molecular function | Repressor |
| Technical term | 3D-structure Plasmid |
| Gene Ontology (GO) | |
| Biological process | conjugation Inferred from electronic annotation. Source: UniProtKB-KW regulation of transcriptionInferred from electronic annotation. Source: UniProtKB-KW transcriptionInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
References
| [1] | "Activity of the Agrobacterium Ti plasmid conjugal transfer regulator TraR is inhibited by the product of the traM gene." Fuqua C., Burbea M., Winans S.C. J. Bacteriol. 177:1367-1373(1995) [PubMed: 7868612] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF242881 Genomic DNA. Translation: AAC28120.1. U16786 Genomic DNA. Translation: AAA64838.1. | ||||||||||||||||||||||||
| PIR | I39703. | ||||||||||||||||||||||||
| RefSeq | NP_059700.1. | ||||||||||||||||||||||||
3D structure databases | |||||||||||||||||||||||||
| PDBe RCSB PDB PDBj |
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| ModBase | Search... | ||||||||||||||||||||||||
Genome annotation databases | |||||||||||||||||||||||||
| GeneID | 1224219. | ||||||||||||||||||||||||
Family and domain databases | |||||||||||||||||||||||||
| InterPro | IPR015309. Transcript_repress_TraM. [Graphical view] | ||||||||||||||||||||||||
| Pfam | PF09228. Prok-TraM. 1 hit. [Graphical view] | ||||||||||||||||||||||||
| PIRSF | PIRSF017930. Transcript_repress_TraM. 1 hit. | ||||||||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||||||||
Entry information
| Entry name | TRAM_RHIRD | ||||||||
| Accession | Primary (citable) accession number: Q57471 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||

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