Q57471 (TRAM_RHIRD) Reviewed, UniProtKB/Swiss-Prot
Last modified
June 28, 2011.
Version 56.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Transcriptional repressor traM | ||
| Gene names |
| ||
| Encoded on | Plasmid pTiA6NC | ||
| Organism | Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter) | ||
| Taxonomic identifier | 358 [NCBI] | ||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium |
Protein attributes
| Sequence length | 102 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Negatively regulates conjugation and the expression of tra genes by antagonizing traR/AAI-dependent activation. TraM may either bind or modify traR or AAI making them unavailable. Alternatively, traM may bind tra promoters preventing traR activation. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Conjugation Transcription Transcription regulation |
| Molecular function | Repressor |
| Technical term | 3D-structure Plasmid |
| Gene Ontology (GO) | |
| Biological process | conjugation Inferred from electronic annotation. Source: UniProtKB-KW negative regulation of transcription, DNA-dependentInferred from electronic annotation. Source: InterPro transcription, DNA-dependentInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
References
| [1] | "Activity of the Agrobacterium Ti plasmid conjugal transfer regulator TraR is inhibited by the product of the traM gene." Fuqua C., Burbea M., Winans S.C. J. Bacteriol. 177:1367-1373(1995) [PubMed: 7868612] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | AF242881 Genomic DNA. Translation: AAC28120.1. U16786 Genomic DNA. Translation: AAA64838.1. | ||||||||||||||||||||||||
| PIR | I39703. | ||||||||||||||||||||||||
| RefSeq | NP_059700.1. NC_002377.1. | ||||||||||||||||||||||||
3D structure databases | |||||||||||||||||||||||||
| PDBe RCSB PDB PDBj |
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| ProteinModelPortal | Q57471. | ||||||||||||||||||||||||
| SMR | Q57471. Positions 1-99. | ||||||||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||||||||
Genome annotation databases | |||||||||||||||||||||||||
| GeneID | 1224219. | ||||||||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||||||||
| ProtClustDB | CLSK539900. | ||||||||||||||||||||||||
Family and domain databases | |||||||||||||||||||||||||
| InterPro | IPR015309. Tscrpt_rep_TraM. [Graphical view] | ||||||||||||||||||||||||
| Pfam | PF09228. Prok-TraM. 1 hit. [Graphical view] | ||||||||||||||||||||||||
| PIRSF | PIRSF017930. Transcript_repress_TraM. 1 hit. | ||||||||||||||||||||||||
| SUPFAM | SSF109631. Transcript_repress_TraM. 1 hit. | ||||||||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||||||||
Entry information
| Entry name | TRAM_RHIRD | ||||||||
| Accession | Primary (citable) accession number: Q57471 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |

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