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Protein
Submitted name:

Fimbrial adapter PapF

Gene

papF

Organism
Escherichia coli
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Fimbrial adapter PapFImported
Submitted name:
Fimbrial adapter papFImported
Submitted name:
Minor fimbrial protein PrsFImported
Submitted name:
PapF proteinImported
Gene namesi
Name:papFImported
ORF Names:AWG90_16780Imported, HMPREF3040_04345Imported, SK85_04490Imported
OrganismiEscherichia coliImported
Taxonomic identifieri562 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000036012 Componenti: Unassembled WGS sequence
  • UP000076649 Componenti: Unassembled WGS sequence
  • UP000070450 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence analysisAdd
BLAST
Chaini20 – 166147Sequence analysisPRO_5007704454Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi199310.c5180.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini23 – 165143FimbrialInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.60.40.1090. 1 hit.
InterProiIPR008966. Adhesion_dom.
IPR000259. Adhesion_dom_fimbrial.
IPR005430. P_pili_tip_PapF.
[Graphical view]
PfamiPF00419. Fimbrial. 1 hit.
[Graphical view]
PRINTSiPR01613. FIMBRIALPAPF.
SUPFAMiSSF49401. SSF49401. 1 hit.

Sequencei

Sequence statusi: Complete.

Q57419-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARLSLFISL LLTSVAVLAD VQINIRGNVY IPPCTINNGQ NIVVDFGNIN
60 70 80 90 100
PEHVDNSRGE ITKTISISCT YKSGSPWIKV TGNAMAGQTN VLATNIANFG
110 120 130 140 150
IALYQGKGMS TPLTLGNGSG NGYRVTAGLD TARSTFTFTS VPFRNGSRTL
160
NGGDFRTTAS MSMIYN
Length:166
Mass (Da):17,648
Last modified:November 1, 1996 - v1
Checksum:iBB4C1822221A2DB6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M94076 Genomic DNA. Translation: AAA24283.1.
M20182 Genomic DNA. Translation: AAA24295.1.
LEUM01000028 Genomic DNA. Translation: KLX90401.1.
LSNZ01000171 Genomic DNA. Translation: KXG92878.1.
LVTB01000172 Genomic DNA. Translation: KZJ49949.1.
PIRiJC1295.
RefSeqiWP_000113350.1. NZ_LVTF01000222.1.

Genome annotation databases

EnsemblBacteriaiKLX09900; KLX09900; SK67_00331.
KLX89297; KLX89297; SK84_02576.
KLX90401; KLX90401; SK85_04490.
KLY02310; KLY02310; SK86_03838.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M94076 Genomic DNA. Translation: AAA24283.1.
M20182 Genomic DNA. Translation: AAA24295.1.
LEUM01000028 Genomic DNA. Translation: KLX90401.1.
LSNZ01000171 Genomic DNA. Translation: KXG92878.1.
LVTB01000172 Genomic DNA. Translation: KZJ49949.1.
PIRiJC1295.
RefSeqiWP_000113350.1. NZ_LVTF01000222.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi199310.c5180.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiKLX09900; KLX09900; SK67_00331.
KLX89297; KLX89297; SK84_02576.
KLX90401; KLX90401; SK85_04490.
KLY02310; KLY02310; SK86_03838.

Family and domain databases

Gene3Di2.60.40.1090. 1 hit.
InterProiIPR008966. Adhesion_dom.
IPR000259. Adhesion_dom_fimbrial.
IPR005430. P_pili_tip_PapF.
[Graphical view]
PfamiPF00419. Fimbrial. 1 hit.
[Graphical view]
PRINTSiPR01613. FIMBRIALPAPF.
SUPFAMiSSF49401. SSF49401. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Structure and antigenic properties of the tip-located P pilus proteins of uropathogenic Escherichia coli."
    Lund B., Lindberg F., Normark S.
    J. Bacteriol. 170:1887-1894(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Sequences of the genes encoding the minor tip components of Pap-3 pili of Escherichia coli."
    Klann A.G., Hull R.A., Hull S.I.
    Gene 119:95-100(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: K-12Imported.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BIDMC112Imported.
  4. Wen L., He K., Yang H.
    Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JPH493Imported.
  5. "WGS of SAMN04393298."
    Adams M., Sutton G., Nelson K., Thaden J., Fowler V., Mccorrison J., Sanka R., Brinkac L., Nierman W.
    Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GN06007Imported.

Entry informationi

Entry nameiQ57419_ECOLX
AccessioniPrimary (citable) accession number: Q57419
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 6, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.