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Protein
Submitted name:

Capsule biosynthesis protein

Gene

synC

Organism
Neisseria meningitidis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi186ManganeseCombined sources1
Metal bindingi215Manganese; via tele nitrogenCombined sources1
Metal bindingi236Manganese; via tele nitrogenCombined sources1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

ManganeseCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
Capsule biosynthesis proteinImported
Submitted name:
Polysialic acid capsule biosynthesis protein SiaCImported
Submitted name:
SiaCImported
Gene namesi
Name:synCImported
Synonyms:siaCImported
ORF Names:ERS514410_00918Imported, ERS514534_01815Imported, ERS514708_01765Imported
OrganismiNeisseria meningitidisImported
Taxonomic identifieri487 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeNeisseria
Proteomesi
  • UP000072239 Componenti: Unassembled WGS sequence
  • UP000075007 Componenti: Unassembled WGS sequence
  • UP000071906 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi122586.NMB0068.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1XUUX-ray1.90A1-349[»]
1XUZX-ray2.20A1-349[»]
2ZDRX-ray1.85A1-349[»]
3CM4X-ray1.85A1-349[»]
4IPIX-ray1.75A1-349[»]
4IPJX-ray2.15A1-349[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini292 – 349AFP-likeInterPro annotationAdd BLAST58

Phylogenomic databases

eggNOGiENOG4105D2T. Bacteria.
COG2089. LUCA.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
3.90.1210.10. 1 hit.
InterProiIPR006190. AFP_Neu5c_C.
IPR013785. Aldolase_TIM.
IPR013132. Neu5Ac_N.
IPR013974. SAF.
[Graphical view]
PfamiPF03102. NeuB. 1 hit.
PF08666. SAF. 1 hit.
[Graphical view]
SMARTiSM00858. SAF. 1 hit.
[Graphical view]
SUPFAMiSSF51269. SSF51269. 1 hit.
PROSITEiPS50844. AFP_LIKE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q57265-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQNNNEFKIG NRSVGYNHEP LIICEIGINH EGSLKTAFEM VDAAYNAGAE
60 70 80 90 100
VVKHQTHIVE DEMSDEAKQV IPGNADVSIY EIMERCALNE EDEIKLKEYV
110 120 130 140 150
ESKGMIFIST PFSRAAALRL QRMDIPAYKI GSGECNNYPL IKLVASFGKP
160 170 180 190 200
IILSTGMNSI ESIKKSVEII REAGVPYALL HCTNIYPTPY EDVRLGGMND
210 220 230 240 250
LSEAFPDAII GLSDHTLDNY ACLGAVALGG SILERHFTDR MDRPGPDIVC
260 270 280 290 300
SMNPDTFKEL KQGAHALKLA RGGKKDTIIA GEKPTKDFAF ASVVADKDIK
310 320 330 340
KGELLSGDNL WVKRPGNGDF SVNEYETLFG KVAACNIRKG AQIKKTDIE
Length:349
Mass (Da):38,348
Last modified:November 1, 1996 - v1
Checksum:i1C7C13EE5847E71A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M95053 Genomic DNA. Translation: AAA20477.1.
U40740 Genomic DNA. Translation: AAB17455.1.
HM037270 Genomic DNA. Translation: ADK90955.1.
FESW01000010 Genomic DNA. Translation: CWO11850.1.
FETN01000038 Genomic DNA. Translation: CWO78397.1.
FFCW01000036 Genomic DNA. Translation: CWT76960.1.
PIRiS60760.
RefSeqiWP_002215299.1. NZ_LWLO01000038.1.

Genome annotation databases

EnsemblBacteriaiAKM89997; AKM89997; B6116_00481.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M95053 Genomic DNA. Translation: AAA20477.1.
U40740 Genomic DNA. Translation: AAB17455.1.
HM037270 Genomic DNA. Translation: ADK90955.1.
FESW01000010 Genomic DNA. Translation: CWO11850.1.
FETN01000038 Genomic DNA. Translation: CWO78397.1.
FFCW01000036 Genomic DNA. Translation: CWT76960.1.
PIRiS60760.
RefSeqiWP_002215299.1. NZ_LWLO01000038.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1XUUX-ray1.90A1-349[»]
1XUZX-ray2.20A1-349[»]
2ZDRX-ray1.85A1-349[»]
3CM4X-ray1.85A1-349[»]
4IPIX-ray1.75A1-349[»]
4IPJX-ray2.15A1-349[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi122586.NMB0068.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAKM89997; AKM89997; B6116_00481.

Phylogenomic databases

eggNOGiENOG4105D2T. Bacteria.
COG2089. LUCA.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
3.90.1210.10. 1 hit.
InterProiIPR006190. AFP_Neu5c_C.
IPR013785. Aldolase_TIM.
IPR013132. Neu5Ac_N.
IPR013974. SAF.
[Graphical view]
PfamiPF03102. NeuB. 1 hit.
PF08666. SAF. 1 hit.
[Graphical view]
SMARTiSM00858. SAF. 1 hit.
[Graphical view]
SUPFAMiSSF51269. SSF51269. 1 hit.
PROSITEiPS50844. AFP_LIKE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ57265_NEIME
AccessioniPrimary (citable) accession number: Q57265
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.