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Protein
Submitted name:

F component of leucocodin R

Gene

hlgB-like ORF

Organism
Staphylococcus aureus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
F component of leucocodin RImported
Submitted name:
Gamma-hemolysin component BImported
Submitted name:
HlgB-like ORF proteinImported
Gene namesi
Name:hlgB-like ORFImported
Synonyms:hlgBImported, luk F-RImported
ORF Names:ERS072840_02421Imported
OrganismiStaphylococcus aureusImported
Taxonomic identifieri1280 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus
Proteomesi
  • UP000069800 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 26Sequence analysisAdd BLAST26
ChainiPRO_500878086627 – 325Sequence analysisAdd BLAST299

Interactioni

Protein-protein interaction databases

STRINGi93062.SACOL2422.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2QK7X-ray2.40B27-325[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini60 – 310LeukocidinInterPro annotationAdd BLAST251

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4106XHW. Bacteria.
ENOG410YTX5. LUCA.

Family and domain databases

Gene3Di2.70.240.10. 1 hit.
InterProiIPR003963. Bi-component_toxin_staph.
IPR016183. Leukocidin/porin.
[Graphical view]
PfamiPF07968. Leukocidin. 1 hit.
[Graphical view]
PRINTSiPR01468. BICOMPNTOXIN.
SUPFAMiSSF56959. SSF56959. 1 hit.
TIGRFAMsiTIGR01002. hlyII. 1 hit.

Sequencei

Sequence statusi: Complete.

Q57227-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNMNKLVKSS VATSMALLLL SNTANAEGKI TPVSVKKVDD KVTLYKTTAT
60 70 80 90 100
ADSDKFKISQ ILTFNFIKDK SYDKDTLVLK AAGNINSGYE RPNPKDYDFS
110 120 130 140 150
KIYWGAKYNV SISSQSNDSV NVVDYAPKNQ NEEFQVQNTL GYTFGGDISI
160 170 180 190 200
SNGLSGGLNG NTAFSETINY KQESYRTTLS RNTNYKNVGW GVEAHKIMNN
210 220 230 240 250
GWGPYGRDSF HPTYGNELFL AGRQSSAYAG QNFIAQHQMP LLSRSNFNPE
260 270 280 290 300
FLSVLSHRQD GAKKSKITVT YQREMDLYQI RWNGFYWAGA NYKNFKTRTF
310 320
KSTYEIDWEN HKVKLLDTKE TENNK
Length:325
Mass (Da):36,812
Last modified:November 1, 1996 - v1
Checksum:i38A0066D8DBD8935
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X64389 Genomic DNA. Translation: CAA45729.1.
X81586 Genomic DNA. Translation: CAA57278.1.
FGEC01000021 Genomic DNA. Translation: CXO17004.1.
PIRiB49234.
RefSeqiWP_001056917.1. NZ_LWRD01000002.1.

Genome annotation databases

EnsemblBacteriaiKQB70858; KQB70858; AL077_06150.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X64389 Genomic DNA. Translation: CAA45729.1.
X81586 Genomic DNA. Translation: CAA57278.1.
FGEC01000021 Genomic DNA. Translation: CXO17004.1.
PIRiB49234.
RefSeqiWP_001056917.1. NZ_LWRD01000002.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2QK7X-ray2.40B27-325[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi93062.SACOL2422.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiKQB70858; KQB70858; AL077_06150.

Phylogenomic databases

eggNOGiENOG4106XHW. Bacteria.
ENOG410YTX5. LUCA.

Family and domain databases

Gene3Di2.70.240.10. 1 hit.
InterProiIPR003963. Bi-component_toxin_staph.
IPR016183. Leukocidin/porin.
[Graphical view]
PfamiPF07968. Leukocidin. 1 hit.
[Graphical view]
PRINTSiPR01468. BICOMPNTOXIN.
SUPFAMiSSF56959. SSF56959. 1 hit.
TIGRFAMsiTIGR01002. hlyII. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ57227_STAAU
AccessioniPrimary (citable) accession number: Q57227
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: November 30, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.