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Q57221

- Q57221_YERPU

UniProt

Q57221 - Q57221_YERPU

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Protein
Submitted name:

-derived mitogen

Gene
ypm
Organism
Yersinia pseudotuberculosis
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
-derived mitogenImported
Submitted name:
Superantigen YPMaImported
Submitted name:
YPMImported
Gene namesi
Name:ypmImported
OrganismiYersinia pseudotuberculosisImported
Taxonomic identifieri633 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020 PredictedImportedAdd
BLAST
Chaini21 – 151131Yersinia pseudotuberculosis-derived mitogen (YPM)ImportedPRO_5000139868Add
BLAST

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1PM4X-ray1.76A/B/C33-151[»]
1POQNMR-A34-151[»]

Miscellaneous databases

EvolutionaryTraceiQ57221.

Family & Domainsi

Keywords - Domaini

SignalImported

Family and domain databases

Gene3Di2.60.120.510. 1 hit.
InterProiIPR015227. Mitogen_YERPS.
[Graphical view]
PfamiPF09144. YpM. 1 hit.
[Graphical view]
SUPFAMiSSF101606. SSF101606. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q57221-1 [UniParc]FASTAAdd to Basket

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MKNKLLSLLT FTLFSGVALA TDYDNTLNSI PSLRIPNIAT YTGTIQGKGE    50
VCIIGNKEGK TRGGELYAVL HSTNVNADMT LILLRNVGGN GWGEIKRNDI 100
DKPLKYEDYY TSGLSWIWKI KNNSSETSNY SLDATVHDDK EDSDVLTKCP 150
V 151
Length:151
Mass (Da):16,679
Last modified:November 1, 1996 - v1
Checksum:i481B32212F3CC65E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF335466 Genomic DNA. Translation: AAK28542.1.
D38523 Genomic DNA. Translation: BAA07528.1.
D38638 Genomic DNA. Translation: BAA07619.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF335466 Genomic DNA. Translation: AAK28542.1 .
D38523 Genomic DNA. Translation: BAA07528.1 .
D38638 Genomic DNA. Translation: BAA07619.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1PM4 X-ray 1.76 A/B/C 33-151 [» ]
1POQ NMR - A 34-151 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei Q57221.

Family and domain databases

Gene3Di 2.60.120.510. 1 hit.
InterProi IPR015227. Mitogen_YERPS.
[Graphical view ]
Pfami PF09144. YpM. 1 hit.
[Graphical view ]
SUPFAMi SSF101606. SSF101606. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "DNA sequencing of the gene encoding a bacterial superantigen, Yersinia pseudotuberculosis-derived mitogen (YPM), and characterization of the gene product, cloned YPM."
    Miyoshi-Akiyama T., Abe A., Kato H., Kawahara K., Narimatsu H., Uchiyama T.
    J. Immunol. 154:5228-5234(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CYP86-15Imported.
  2. "Sequence analysis of the gene for a novel superantigen produced by Yersinia pseudotuberculosis and expression of the recombinant protein."
    Ito Y., Abe J., Yoshino K., Takeda T., Kohsaka T.
    J. Immunol. 154:5896-5906(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: KUR-1Imported.
  3. Carnoy C.A., Floquet S., Herwegh S., Devalckenaere A., Simonet M.
    Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: AHImported.
  4. "The superantigen gene ypm is located in an unstable chromosomal locus of Yersinia pseudotuberculosis."
    Carnoy C., Floquet S., Marceau M., Sebbane F., Haentjens-Herwegh S., Devalckenaere A., Simonet M.
    J. Bacteriol. 184:4489-4499(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: AHImported.
  5. "Crystal and solution structures of a superantigen from Yersinia pseudotuberculosis reveal a jelly-roll fold."
    Donadini R., Liew C.W., Kwan A.H., Mackay J.P., Fields B.A.
    Structure 12:145-156(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.76 ANGSTROMS) OF 33-151.

Entry informationi

Entry nameiQ57221_YERPU
AccessioniPrimary (citable) accession number: Q57221
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: March 19, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3

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