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Q57221

- Q57221_YERPU

UniProt

Q57221 - Q57221_YERPU

Protein
Submitted name:

-derived mitogen

Gene

ypm

Organism
Yersinia pseudotuberculosis
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Names & Taxonomyi

    Protein namesi
    Submitted name:
    -derived mitogenImported
    Submitted name:
    Superantigen YPMaImported
    Submitted name:
    YPMImported
    Gene namesi
    Name:ypmImported
    OrganismiYersinia pseudotuberculosisImported
    Taxonomic identifieri633 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2020 PotentialImportedAdd
    BLAST
    Chaini21 – 151131Yersinia pseudotuberculosis-derived mitogen (YPM)ImportedPRO_5000139868Add
    BLAST

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1PM4X-ray1.76A/B/C33-151[»]
    1POQNMR-A34-151[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiQ57221.

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Family and domain databases

    Gene3Di2.60.120.510. 1 hit.
    InterProiIPR015227. Mitogen_YERPS.
    [Graphical view]
    PfamiPF09144. YpM. 1 hit.
    [Graphical view]
    SUPFAMiSSF101606. SSF101606. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q57221-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKNKLLSLLT FTLFSGVALA TDYDNTLNSI PSLRIPNIAT YTGTIQGKGE    50
    VCIIGNKEGK TRGGELYAVL HSTNVNADMT LILLRNVGGN GWGEIKRNDI 100
    DKPLKYEDYY TSGLSWIWKI KNNSSETSNY SLDATVHDDK EDSDVLTKCP 150
    V 151
    Length:151
    Mass (Da):16,679
    Last modified:November 1, 1996 - v1
    Checksum:i481B32212F3CC65E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF335466 Genomic DNA. Translation: AAK28542.1.
    D38523 Genomic DNA. Translation: BAA07528.1.
    D38638 Genomic DNA. Translation: BAA07619.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF335466 Genomic DNA. Translation: AAK28542.1 .
    D38523 Genomic DNA. Translation: BAA07528.1 .
    D38638 Genomic DNA. Translation: BAA07619.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1PM4 X-ray 1.76 A/B/C 33-151 [» ]
    1POQ NMR - A 34-151 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Miscellaneous databases

    EvolutionaryTracei Q57221.

    Family and domain databases

    Gene3Di 2.60.120.510. 1 hit.
    InterProi IPR015227. Mitogen_YERPS.
    [Graphical view ]
    Pfami PF09144. YpM. 1 hit.
    [Graphical view ]
    SUPFAMi SSF101606. SSF101606. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "DNA sequencing of the gene encoding a bacterial superantigen, Yersinia pseudotuberculosis-derived mitogen (YPM), and characterization of the gene product, cloned YPM."
      Miyoshi-Akiyama T., Abe A., Kato H., Kawahara K., Narimatsu H., Uchiyama T.
      J. Immunol. 154:5228-5234(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CYP86-15Imported.
    2. "Sequence analysis of the gene for a novel superantigen produced by Yersinia pseudotuberculosis and expression of the recombinant protein."
      Ito Y., Abe J., Yoshino K., Takeda T., Kohsaka T.
      J. Immunol. 154:5896-5906(1995) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: KUR-1Imported.
    3. Carnoy C.A., Floquet S., Herwegh S., Devalckenaere A., Simonet M.
      Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: AHImported.
    4. "The superantigen gene ypm is located in an unstable chromosomal locus of Yersinia pseudotuberculosis."
      Carnoy C., Floquet S., Marceau M., Sebbane F., Haentjens-Herwegh S., Devalckenaere A., Simonet M.
      J. Bacteriol. 184:4489-4499(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: AHImported.
    5. "Crystal and solution structures of a superantigen from Yersinia pseudotuberculosis reveal a jelly-roll fold."
      Donadini R., Liew C.W., Kwan A.H., Mackay J.P., Fields B.A.
      Structure 12:145-156(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.76 ANGSTROMS) OF 33-151.

    Entry informationi

    Entry nameiQ57221_YERPU
    AccessioniPrimary (citable) accession number: Q57221
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 1, 1996
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 52 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3