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Q57221 (Q57221_YERPU) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Superantigen YPMa EMBL AAK28542.1

YPM EMBL BAA07528.1
Gene names
Name:ypm EMBL BAA07619.1
OrganismYersinia pseudotuberculosis EMBL BAA07619.1
Taxonomic identifier633 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Protein attributes

Sequence length151 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

Ontologies

Keywords
   DomainSignal EMBL BAA07619.1
   Technical term3D-structure PDB 1POQ PDB 1PM4
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2020 Potential EMBL BAA07619.1
Chain21 – 151131Yersinia pseudotuberculosis-derived mitogen (YPM) EMBL BAA07619.1
PRO_5000139868

Sequences

Sequence LengthMass (Da)Tools
Q57221 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 481B32212F3CC65E

FASTA15116,679
        10         20         30         40         50         60 
MKNKLLSLLT FTLFSGVALA TDYDNTLNSI PSLRIPNIAT YTGTIQGKGE VCIIGNKEGK 

        70         80         90        100        110        120 
TRGGELYAVL HSTNVNADMT LILLRNVGGN GWGEIKRNDI DKPLKYEDYY TSGLSWIWKI 

       130        140        150 
KNNSSETSNY SLDATVHDDK EDSDVLTKCP V 

« Hide

References

[1]"DNA sequencing of the gene encoding a bacterial superantigen, Yersinia pseudotuberculosis-derived mitogen (YPM), and characterization of the gene product, cloned YPM."
Miyoshi-Akiyama T., Abe A., Kato H., Kawahara K., Narimatsu H., Uchiyama T.
J. Immunol. 154:5228-5234(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CYP86-15 EMBL BAA07619.1.
[2]"Sequence analysis of the gene for a novel superantigen produced by Yersinia pseudotuberculosis and expression of the recombinant protein."
Ito Y., Abe J., Yoshino K., Takeda T., Kohsaka T.
J. Immunol. 154:5896-5906(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: KUR-1 EMBL BAA07528.1.
[3]Carnoy C.A., Floquet S., Herwegh S., Devalckenaere A., Simonet M.
Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: AH EMBL AAK28542.1.
[4]"The superantigen gene ypm is located in an unstable chromosomal locus of Yersinia pseudotuberculosis."
Carnoy C., Floquet S., Marceau M., Sebbane F., Haentjens-Herwegh S., Devalckenaere A., Simonet M.
J. Bacteriol. 184:4489-4499(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: AH EMBL AAK28542.1.
[5]"Crystal and solution structures of a superantigen from Yersinia pseudotuberculosis reveal a jelly-roll fold."
Donadini R., Liew C.W., Kwan A.H., Mackay J.P., Fields B.A.
Structure 12:145-156(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.76 ANGSTROMS) OF 33-151.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF335466 Genomic DNA. Translation: AAK28542.1.
D38523 Genomic DNA. Translation: BAA07528.1.
D38638 Genomic DNA. Translation: BAA07619.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
1PM4X-ray1.76A/B/C33-151[»]
1POQNMR-A34-151[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.120.510. 1 hit.
InterProIPR015227. Mitogen_YERPS.
[Graphical view]
PfamPF09144. YpM. 1 hit.
[Graphical view]
SUPFAMSSF101606. SSF101606. 1 hit.
ProtoNetSearch...

Other

EvolutionaryTraceQ57221.

Entry information

Entry nameQ57221_YERPU
AccessionPrimary (citable) accession number: Q57221
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: March 19, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)