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Q57221

- Q57221_YERPU

UniProt

Q57221 - Q57221_YERPU

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Protein
Submitted name:

-derived mitogen

Gene

ypm

Organism
Yersinia pseudotuberculosis
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
-derived mitogenImported
Submitted name:
Superantigen YPMaImported
Submitted name:
YPMImported
Gene namesi
Name:ypmImported
OrganismiYersinia pseudotuberculosisImported
Taxonomic identifieri633 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020 PotentialImportedAdd
BLAST
Chaini21 – 151131Yersinia pseudotuberculosis-derived mitogen (YPM)ImportedPRO_5000139868Add
BLAST

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1PM4X-ray1.76A/B/C33-151[»]
1POQNMR-A34-151[»]
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ57221.

Family & Domainsi

Keywords - Domaini

SignalImported

Family and domain databases

Gene3Di2.60.120.510. 1 hit.
InterProiIPR015227. Mitogen_YERPS.
[Graphical view]
PfamiPF09144. YpM. 1 hit.
[Graphical view]
SUPFAMiSSF101606. SSF101606. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q57221-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKNKLLSLLT FTLFSGVALA TDYDNTLNSI PSLRIPNIAT YTGTIQGKGE
60 70 80 90 100
VCIIGNKEGK TRGGELYAVL HSTNVNADMT LILLRNVGGN GWGEIKRNDI
110 120 130 140 150
DKPLKYEDYY TSGLSWIWKI KNNSSETSNY SLDATVHDDK EDSDVLTKCP

V
Length:151
Mass (Da):16,679
Last modified:November 1, 1996 - v1
Checksum:i481B32212F3CC65E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF335466 Genomic DNA. Translation: AAK28542.1.
D38523 Genomic DNA. Translation: BAA07528.1.
D38638 Genomic DNA. Translation: BAA07619.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF335466 Genomic DNA. Translation: AAK28542.1 .
D38523 Genomic DNA. Translation: BAA07528.1 .
D38638 Genomic DNA. Translation: BAA07619.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1PM4 X-ray 1.76 A/B/C 33-151 [» ]
1POQ NMR - A 34-151 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Miscellaneous databases

EvolutionaryTracei Q57221.

Family and domain databases

Gene3Di 2.60.120.510. 1 hit.
InterProi IPR015227. Mitogen_YERPS.
[Graphical view ]
Pfami PF09144. YpM. 1 hit.
[Graphical view ]
SUPFAMi SSF101606. SSF101606. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "DNA sequencing of the gene encoding a bacterial superantigen, Yersinia pseudotuberculosis-derived mitogen (YPM), and characterization of the gene product, cloned YPM."
    Miyoshi-Akiyama T., Abe A., Kato H., Kawahara K., Narimatsu H., Uchiyama T.
    J. Immunol. 154:5228-5234(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CYP86-15Imported.
  2. "Sequence analysis of the gene for a novel superantigen produced by Yersinia pseudotuberculosis and expression of the recombinant protein."
    Ito Y., Abe J., Yoshino K., Takeda T., Kohsaka T.
    J. Immunol. 154:5896-5906(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: KUR-1Imported.
  3. Carnoy C.A., Floquet S., Herwegh S., Devalckenaere A., Simonet M.
    Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: AHImported.
  4. "The superantigen gene ypm is located in an unstable chromosomal locus of Yersinia pseudotuberculosis."
    Carnoy C., Floquet S., Marceau M., Sebbane F., Haentjens-Herwegh S., Devalckenaere A., Simonet M.
    J. Bacteriol. 184:4489-4499(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: AHImported.
  5. "Crystal and solution structures of a superantigen from Yersinia pseudotuberculosis reveal a jelly-roll fold."
    Donadini R., Liew C.W., Kwan A.H., Mackay J.P., Fields B.A.
    Structure 12:145-156(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.76 ANGSTROMS) OF 33-151.

Entry informationi

Entry nameiQ57221_YERPU
AccessioniPrimary (citable) accession number: Q57221
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 29, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3