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Protein

Probable ABC transporter permease protein HI_1471

Gene

HI_1471

Organism
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane.

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Transport

Protein family/group databases

TCDBi3.A.1.14.11. the atp-binding cassette (abc) superfamily.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable ABC transporter permease protein HI_1471
Gene namesi
Ordered Locus Names:HI_1471
OrganismiHaemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Taxonomic identifieri71421 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeHaemophilus
Proteomesi
  • UP000000579 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei8 – 28HelicalSequence analysisAdd BLAST21
Transmembranei66 – 86HelicalSequence analysisAdd BLAST21
Transmembranei109 – 129HelicalSequence analysisAdd BLAST21
Transmembranei147 – 167HelicalSequence analysisAdd BLAST21
Transmembranei196 – 216HelicalSequence analysisAdd BLAST21
Transmembranei247 – 267HelicalSequence analysisAdd BLAST21
Transmembranei281 – 301HelicalSequence analysisAdd BLAST21
Transmembranei307 – 327HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000602811 – 337Probable ABC transporter permease protein HI_1471Add BLAST337

Interactioni

Protein-protein interaction databases

DIPiDIP-58991N.
STRINGi71421.HI1471.

Structurei

Secondary structure

1337
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi7 – 24Combined sources18
Helixi53 – 60Combined sources8
Helixi62 – 86Combined sources25
Turni94 – 97Combined sources4
Helixi99 – 112Combined sources14
Helixi117 – 139Combined sources23
Helixi147 – 170Combined sources24
Turni174 – 176Combined sources3
Helixi177 – 184Combined sources8
Helixi194 – 213Combined sources20
Turni214 – 216Combined sources3
Helixi217 – 222Combined sources6
Helixi225 – 230Combined sources6
Helixi235 – 257Combined sources23
Helixi266 – 275Combined sources10
Helixi279 – 303Combined sources25
Helixi311 – 328Combined sources18

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2NQ2X-ray2.40A/B1-337[»]
ProteinModelPortaliQ57130.
SMRiQ57130.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ57130.

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105EHG. Bacteria.
COG0609. LUCA.
KOiK02015.
OMAiTLQGVFQ.
PhylomeDBiQ57130.

Family and domain databases

Gene3Di1.10.3470.10. 1 hit.
InterProiIPR029022. ABC_BtuC-like.
IPR000522. ABC_transptr_FecCD.
[Graphical view]
PANTHERiPTHR30472. PTHR30472. 1 hit.
PfamiPF01032. FecCD. 1 hit.
[Graphical view]
SUPFAMiSSF81345. SSF81345. 1 hit.

Sequencei

Sequence statusi: Complete.

Q57130-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQPDSYPKIL FGLTLLLVIT AVISLGIGRY SLSVPQIGQI LWAKATALEI
60 70 80 90 100
DPVQQQVIFQ VRLPRILTAL CVGAGLALSG VVLQGIFRNP LVNPHIIGVT
110 120 130 140 150
SGSAFGGTLA IFFGFSLYGL FTSTILFGFG TLALVFLFSF KFNQRSLLML
160 170 180 190 200
ILIGMILSGL FSALVSLLQY ISDTEEKLPS IVFWLMGSFA TSNWEKLLFF
210 220 230 240 250
FVPFLLCSSI LLSLSWRLNL LSLDEKEAKA LGVKMAPLRW LVIFLSGSLV
260 270 280 290 300
ACQVAISGSI GWVGLIIPHL SRMLVGANHQ SLLPCTMLVG ATYMLLVDNV
310 320 330
ARSLSDAEIP ISILTALIGA PLFGVLVYKL KRGGMNE
Length:337
Mass (Da):36,531
Last modified:November 1, 1996 - v1
Checksum:i83298CCBCF2DC1F5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L42023 Genomic DNA. Translation: AAC23119.1.
PIRiG64125.
RefSeqiNP_439622.1. NC_000907.1.
WP_005693487.1. NC_000907.1.

Genome annotation databases

EnsemblBacteriaiAAC23119; AAC23119; HI_1471.
GeneIDi950354.
KEGGihin:HI1471.
PATRICi20191657. VBIHaeInf48452_1538.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L42023 Genomic DNA. Translation: AAC23119.1.
PIRiG64125.
RefSeqiNP_439622.1. NC_000907.1.
WP_005693487.1. NC_000907.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2NQ2X-ray2.40A/B1-337[»]
ProteinModelPortaliQ57130.
SMRiQ57130.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-58991N.
STRINGi71421.HI1471.

Protein family/group databases

TCDBi3.A.1.14.11. the atp-binding cassette (abc) superfamily.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC23119; AAC23119; HI_1471.
GeneIDi950354.
KEGGihin:HI1471.
PATRICi20191657. VBIHaeInf48452_1538.

Phylogenomic databases

eggNOGiENOG4105EHG. Bacteria.
COG0609. LUCA.
KOiK02015.
OMAiTLQGVFQ.
PhylomeDBiQ57130.

Miscellaneous databases

EvolutionaryTraceiQ57130.

Family and domain databases

Gene3Di1.10.3470.10. 1 hit.
InterProiIPR029022. ABC_BtuC-like.
IPR000522. ABC_transptr_FecCD.
[Graphical view]
PANTHERiPTHR30472. PTHR30472. 1 hit.
PfamiPF01032. FecCD. 1 hit.
[Graphical view]
SUPFAMiSSF81345. SSF81345. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY1471_HAEIN
AccessioniPrimary (citable) accession number: Q57130
Secondary accession number(s): O05065
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: November 2, 2016
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Haemophilus influenzae
    Haemophilus influenzae (strain Rd): entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.