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Protein

Chaperonin 60 subunit alpha 2, chloroplastic

Gene

CPN60A2

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Involved in protein assisted folding.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionChaperone
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Chaperonin 60 subunit alpha 2, chloroplastic
Short name:
CPN-60 alpha 2
Alternative name(s):
Protein EMBRYO DEFECTIVE 3007
Gene namesi
Name:CPN60A2
Synonyms:Cpn60-A(1), EMB3007
Ordered Locus Names:At5g18820
ORF Names:F17K4.70
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G18820.
TAIRilocus:2144955. AT5G18820.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 32ChloroplastSequence analysisAdd BLAST32
ChainiPRO_000041368333 – 575Chaperonin 60 subunit alpha 2, chloroplasticAdd BLAST543

Proteomic databases

PaxDbiQ56XV8.
PRIDEiQ56XV8.

Expressioni

Gene expression databases

ExpressionAtlasiQ56XV8. baseline and differential.
GenevisibleiQ56XV8. AT.

Interactioni

Subunit structurei

Part of the Cpn60 complex composed of 7 alpha and 7 beta subunits.By similarity

GO - Molecular functioni

Protein-protein interaction databases

BioGridi17276. 1 interactor.
STRINGi3702.AT5G18820.1.

Structurei

3D structure databases

ProteinModelPortaliQ56XV8.
SMRiQ56XV8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the chaperonin (HSP60) family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG0356. Eukaryota.
COG0459. LUCA.
HOGENOMiHOG000076290.
InParanoidiQ56XV8.
OMAiHFITNPD.
OrthoDBiEOG093606F2.
PhylomeDBiQ56XV8.

Family and domain databases

CDDicd03344. GroEL. 1 hit.
Gene3Di1.10.560.10. 2 hits.
3.50.7.10. 1 hit.
InterProiView protein in InterPro
IPR001844. Chaprnin_Cpn60.
IPR002423. Cpn60/TCP-1.
IPR037290. Cpn60/TCP-1_sf.
IPR027409. GroEL-like_apical_dom_sf.
IPR027413. GROEL-like_equatorial_sf.
PANTHERiPTHR11353. PTHR11353. 1 hit.
PfamiView protein in Pfam
PF00118. Cpn60_TCP1. 1 hit.
PRINTSiPR00298. CHAPERONIN60.
SUPFAMiSSF48592. SSF48592. 2 hits.
SSF52029. SSF52029. 1 hit.
SSF54849. SSF54849. 2 hits.
TIGRFAMsiTIGR02348. GroEL. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q56XV8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFAVSPSSFS PTTISPRRSG QRNEPRKFSV VRAGAKRILY GKDSREKLQA
60 70 80 90 100
GIDKLADAVS ITLGPRGRNV VLAEKDTIKV INDGVTIAKS IELPDTIENA
110 120 130 140 150
GATLIQEVAI KMNESAGDGT TTAIILAREM IKAGSLAIAF GANAVSVKNG
160 170 180 190 200
MNKTVKELVR VLQMKSIPVQ GKNDIKAVAS ISAGNDEFVG NLIAETVEKI
210 220 230 240 250
GPDGVISIES SSTSETSVIV EEGMKFDKGY MSPHFITNQE KSTVEFDKAK
260 270 280 290 300
ILVTDQKITS AKELVPLLEK TSQLSVPLLI IAEDISAEVL EILVVNKKQG
310 320 330 340 350
LINVAVVKCP GMLDGKKALL QDIALMTGAD YLSGDLGMSL MGATSDQLGV
360 370 380 390 400
SRRVVITANS TTIVADASTK PEIQARIAQM KKDLAETDNS YLSKKIAERI
410 420 430 440 450
AKLTGGVAVI KVGGHTETEL EDRKLRIEDA KNATFAAMRE GIVPGGGATY
460 470 480 490 500
IHLLDEIPRI KKNLMEDSYE QIGADIVAMA LTAPAMAIAT NAGVDGSVVV
510 520 530 540 550
QKTRELEWRS GYNAMSGKYE DLLNAGIADP CRVSRFALQN AVSVAGIILT
560 570
TQAVLVEKIK QPKPAVPQVP GIPTS
Length:575
Mass (Da):61,193
Last modified:May 10, 2005 - v1
Checksum:i2B21F1FDDBC96EB6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC068655 Genomic DNA. No translation available.
CP002688 Genomic DNA. Translation: AED92616.1.
AK221565 mRNA. Translation: BAD94998.1.
RefSeqiNP_197383.1. NM_121887.3.
UniGeneiAt.54910.

Genome annotation databases

EnsemblPlantsiAT5G18820.1; AT5G18820.1; AT5G18820.
GeneIDi832000.
GrameneiAT5G18820.1; AT5G18820.1; AT5G18820.
KEGGiath:AT5G18820.

Similar proteinsi

Entry informationi

Entry nameiCPNA2_ARATH
AccessioniPrimary (citable) accession number: Q56XV8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 19, 2011
Last sequence update: May 10, 2005
Last modified: November 22, 2017
This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families