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Protein
Submitted name:

Floral homeotic protein, AGL9

Gene

At1g24260

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. sequence-specific DNA binding transcription factor activity Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Floral homeotic protein, AGL9Imported
Gene namesi
Ordered Locus Names:At1g24260Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: InterPro
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiQ56X18.

Expressioni

Gene expression databases

ExpressionAtlasiQ56X18. baseline and differential.
GenevestigatoriQ56X18.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000155301.

Family and domain databases

InterProiIPR002487. TF_Kbox.
[Graphical view]
PfamiPF01486. K-box. 1 hit.
[Graphical view]
PROSITEiPS51297. K_BOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

Q56X18-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
NLLGEDLGPL STKELESLER QLDSSLKQIR ALRTQFMLDQ LNDLQSKERM
60 70 80 90 100
LTETNKTLRL RLADGYQMPL QLNPNQEEVD HYGRHHHQQQ QHSQAFFQPL
110 120 130
ECEPILQIGY QGQQDGMGAG PSVNNYMLGW LPYDTNSI
Length:138
Mass (Da):15,922
Last modified:May 10, 2005 - v1
Checksum:iCC4AA4C030A3C4AC
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK221861 mRNA. Translation: BAD94144.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK221861 mRNA. Translation: BAD94144.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiQ56X18.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOGENOMiHOG000155301.

Gene expression databases

ExpressionAtlasiQ56X18. baseline and differential.
GenevestigatoriQ56X18.

Family and domain databases

InterProiIPR002487. TF_Kbox.
[Graphical view]
PfamiPF01486. K-box. 1 hit.
[Graphical view]
PROSITEiPS51297. K_BOX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
    Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.
    , Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
    Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ56X18_ARATH
AccessioniPrimary (citable) accession number: Q56X18
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: October 29, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.