Q56W28 (Q56W28_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase 2 EMBL AEE34444.1

Submitted name:
Putative uncharacterized protein At1g65960 EMBL BAD95387.1

Gene names

Name:	GAD2 EMBL AEE34444.1
Ordered Locus Names:	At1g65960 EMBL BAD95387.1
ORF Names:	AT1G65960 EMBL AEE34444.1

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome] EMBL BAD95387.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	365 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q56W28 [UniParc]. Last modified May 10, 2005. Version 1. Checksum: 453EF3409DABB0E1	FASTA	365	41,752
	10 20 30 40 50 60 MLAGLAFKRK WQNKRKAEGK PYDKPNIVTG ANVQVCWEKF ARYFEVELKE VNLSEGYYVM 70 80 90 100 110 120 DPDKAAEMVD ENTICVAAIL GSTLNGEFED VKRLNDLLVK KNEETGWNTP IHVDAASGGF 130 140 150 160 170 180 IAPFIYPELE WDFRLPLVKS INVSGHKYGL VYAGIGWVVW RAAEDLPEEL IFHINYLGAD 190 200 210 220 230 240 QPTFTLNFSK GSSQIIAQYY QLIRLGFEGY KNVMENCIEN MVVLKEGIEK TERFNIVSKD 250 260 270 280 290 300 QGVPVVAFSL KDHSFHNEFE ISEMLRRFGW IVPAYTMPAD AQHITVLRVV IREDFSRTLA 310 320 330 340 350 360 ERLVADISKV LHELDTLPSK ISKKMGIEGI AENVKEKKME KEILMEVIVG WRKFVKERKK MNGVC

References

[1]

"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs." Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K. , Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K. Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

[2]

The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002684 Genomic DNA. Translation: AEE34444.1. AK222191 mRNA. Translation: BAD95332.1. AK222219 mRNA. Translation: BAD95387.1.
IPI	IPI00657036.
RefSeq	NP_176771.2. NM_105268.6.
UniGene	At.19149. At.20543. At.24993. At.66846.
3D structure databases
SMR	Q56W28. Positions 1-318.
ModBase	Search...
Protocols and materials databases
DNASU	842908.
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT1G65960.1; AT1G65960.1; AT1G65960.
GeneID	842908.
KEGG	ath:AT1G65960.
Phylogenomic databases
HOGENOM	HOG000070228.
KO	K01580.
ProtClustDB	CLSN2683665.
Gene expression databases
Genevestigator	Q56W28.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q56W28_ARATH

Accession

Primary (citable) accession number: Q56W28

Entry history

Integrated into UniProtKB/TrEMBL:	May 10, 2005
Last sequence update:	May 10, 2005
Last modified:	April 3, 2013
This is version 56 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)