Skip Header

 
Contribute Send feedback
Read comments (0) or add your own

Reviewed, UniProtKB/Swiss-Prot Q56UD1 (INV5_ORYSJ)

Last modified September 22, 2009. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Beta-fructofuranosidase, insoluble isoenzyme 5
    EC=3.2.1.26
Alternative name(s):
    Sucrose hydrolase 5
    Invertase 5
    Cell wall beta-fructosidase 5
    OsCIN5
Gene names
Name: CIN5
Ordered Locus Names: Os04g0664900, LOC_Os04g56930
ORF Names: OSJNBa0087O24.4
OrganismOryza sativa subsp. japonica (Rice)
Taxonomic identifier39947 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length542 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

General annotation (Comments)

Function

May play a role in stress response.

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.

Subcellular location

Secretedextracellular spaceapoplast Probable. Secretedcell wall Probable. Note: Associated to the cell wall Probable.

Tissue specificity

Expressed in roots and leaves. Ref.2

Induction

By rice blast fungus (M.grisea) 48 hours after infection. Down-regulated by sucrose in excised leaves. Ref.2

Sequence similarities

Belongs to the glycosyl hydrolase 32 family.

Sequence caution

The sequence CAE03581.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
   Cellular componentApoplast
Cell wall
Secreted
   Molecular functionGlycosidase
Hydrolase
   PTMDisulfide bond
Glycoprotein
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentapoplast

Inferred from electronic annotation. Source: UniProtKB-SubCell

cell wall

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionbeta-fructofuranosidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 542542Beta-fructofuranosidase, insoluble isoenzyme 5
PRO_0000169867

Regions

Region50 – 534Substrate binding By similarity
Region114 – 1152Substrate binding By similarity
Region178 – 1792Substrate binding By similarity

Sites

Active site531 By similarity
Binding site691Substrate By similarity
Binding site771Substrate By similarity
Binding site2331Substrate By similarity

Amino acid modifications

Glycosylation1421N-linked (GlcNAc...) Potential
Glycosylation5101N-linked (GlcNAc...) Potential
Glycosylation5161N-linked (GlcNAc...) Potential
Disulfide bond389 ↔ 436 By similarity

Sequences

Sequence LengthMass (Da)Tools
Q56UD1-1 [UniParc].

Last modified April 29, 2008. Version 3.
Checksum: C5B64DB46B00FBDE

FASTA54259,533
        10         20         30         40         50         60 
MQLLVPIYKR HSNSNFKVSS CSSSPMCPVN GKLQLHDGRT AYHFQPAKFW QNDPNGPLYH 

        70         80         90        100        110        120 
NGLYHFFYQY NPHGPLWDTG KLSWGHSVSG DLVNWAFLGT AIDPTDPFDV NGCWSGSATV 

       130        140        150        160        170        180 
LLGGRPAFLY TGRDAGGVQV QNVSFAKNPL DPLLREWEKP SCNPIIAFPA DVINNNFRDP 

       190        200        210        220        230        240 
TTAWLGRDGL WRMVVAAEVA GAGSALVYRS ADFLRWERNA APMHSSAAVP VLECPDFFPV 

       250        260        270        280        290        300 
AEHGIDGLDT SANGGGTGVK HVLKLSEFDT HQDFYMVGRN RRVQWLWVNE YDSKADDVAK 

       310        320        330        340        350        360 
GWAGVQAFPR KVWLDGDGKQ LLQWPVDEIE TLRTKRVGLQ GTEVKAGGLH EIVGVASSQA 

       370        380        390        400        410        420 
DVEVVFEIPN LEDEAESFDP DWLDPHKLCK DKGAASAHGG VGPFGLIVMA SGDLQEQTAV 

       430        440        450        460        470        480 
FFRVFKHHGK YKVFMCTDLT RSSTKADVYK DAYGGFVDVD IQKDKSISLR TLIDHSMIES 

       490        500        510        520        530        540 
FGGGGRACIT TRVYPEHAAT SSSHLYVFNN GSGTVNVSKL EAWEMATATV NSADALDAIT 


RS 

« Hide

Cross-references

Sequence databases

AL606646 Genomic DNA. Translation: CAE03581.1. Sequence problems.
AY578162 mRNA. Translation: AAT84405.1. Different initiation.

3D structure databases

ModBaseSearch...

Organism-specific databases

GrameneQ56UD1.

Family and domain databases

InterProIPR001362. Glyco_hydro_32.
IPR018053. Glyco_hydro_32_AS.
IPR013189. Glyco_hydro_32_C.
IPR013148. Glyco_hydro_32_N.
[Graphical view]
PfamPF08244. Glyco_hydro_32C. 1 hit.
PF00251. Glyco_hydro_32N. 2 hits.
[Graphical view]
SMARTSM00640. Glyco_32. 1 hit.
[Graphical view]
PROSITEPS00609. GLYCOSYL_HYDROL_F32. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameINV5_ORYSJ
AccessionPrimary (citable) accession number: Q56UD1
Secondary accession number(s): Q7XPK5
Entry history
Integrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: April 29, 2008
Last modified: September 22, 2009
This is version 25 of the entry and version 3 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectPPAP (Plant Proteome Annotation Project)

Relevant documents

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

Oryza sativa (rice)

Index of Oryza sativa entries and their corresponding gene designations

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents