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Q56A16 (Q56A16_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Lonp1 EMBL AAH92212.1 MGI 1921392
Synonyms:Prss15 MGI 1921392
OrganismMus musculus (Mouse) EMBL AAH92212.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length414 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Biological_processATP catabolic process

Inferred from direct assay PubMed 12657466. Source: MGI

aging

Inferred from electronic annotation. Source: Ensembl

cellular response to oxidative stress

Inferred from Biological aspect of Ancestor. Source: RefGenome

chaperone-mediated protein complex assembly

Inferred from Biological aspect of Ancestor. Source: RefGenome

misfolded or incompletely synthesized protein catabolic process

Inferred from Biological aspect of Ancestor. Source: RefGenome

mitochondrion organization

Inferred from Biological aspect of Ancestor. Source: RefGenome

oxidation-dependent protein catabolic process

Inferred from Biological aspect of Ancestor. Source: RefGenome

protein homooligomerization

Inferred from Biological aspect of Ancestor. Source: RefGenome

proteolysis

Inferred from direct assay PubMed 12657466. Source: MGI

response to aluminum ion

Inferred from electronic annotation. Source: Ensembl

response to hormone

Inferred from electronic annotation. Source: Ensembl

response to hypoxia

Inferred from Biological aspect of Ancestor. Source: RefGenome

   Cellular_componentmitochondrial nucleoid

Inferred from Biological aspect of Ancestor. Source: RefGenome

mitochondrion

Inferred from direct assay PubMed 12657466PubMed 14651853PubMed 18614015. Source: MGI

   Molecular_functionADP binding

Inferred from electronic annotation. Source: Ensembl

ATP binding

Inferred from Biological aspect of Ancestor. Source: RefGenome

ATP-dependent peptidase activity

Inferred from direct assay PubMed 12657466. Source: MGI

ATPase activity

Inferred from direct assay PubMed 12657466. Source: MGI

G-quadruplex DNA binding

Inferred from electronic annotation. Source: Ensembl

mitochondrial light strand promoter anti-sense binding

Inferred from direct assay PubMed 12657466. Source: MGI

serine-type endopeptidase activity

Inferred from Biological aspect of Ancestor. Source: RefGenome

single-stranded DNA binding

Inferred from direct assay PubMed 12657466. Source: MGI

single-stranded RNA binding

Inferred from Biological aspect of Ancestor. Source: RefGenome

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAH92212.1

Sequences

Sequence LengthMass (Da)Tools
Q56A16 [UniParc].

Last modified May 10, 2005. Version 1.
Checksum: B58B9E0635585A61

FASTA41445,444
        10         20         30         40         50         60 
FSVGGMTDVA EIKGHRRTYV GAMPGKIIQC LKKTKTENPL VLIDEVDKIG RGYQGDPSSA 

        70         80         90        100        110        120 
LLELLDPEQN ANFLDHYLDV PVDLSKVLFI CTANVIDTIP EPLRDRMEMI NVSGYVAQEK 

       130        140        150        160        170        180 
LAIAERYLVP QARTLCGLDE SKAQLSAAVL TLLIKQYCRE SGVRNLQKQV EKVLRKAAYK 

       190        200        210        220        230        240 
IVSGEAQTVQ VTPENLQDFV GKPVFTVERM YEVTPPGVVM GLAWTAMGGS TLFVETSLRR 

       250        260        270        280        290        300 
PQPSGSKEDK DGSLEVTGQL GDVMKESARI AYTYARAFLM EQDPENDFLV TSHIHLHVPE 

       310        320        330        340        350        360 
GATPKDGPSA GCTIVTALLS LALGQPVLQN LAMTGEVSLT GKVLPVGGIK EKTIAAKRAG 

       370        380        390        400        410 
VTCIILPAEN RKDYSDLAPF ITEGLEVHFV EHYRDIFPIA FPRREHREAL AVER 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6 EMBL AAH92212.1.
Tissue: Brain EMBL AAH92212.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC092212 mRNA. Translation: AAH92212.1.
UniGeneMm.329136.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCuc008dco.2. mouse.

Organism-specific databases

MGIMGI:1921392. Lonp1.

Phylogenomic databases

HOVERGENHBG000798.
InParanoidQ56A16.

Gene expression databases

ArrayExpressQ56A16.
BgeeQ56A16.
GenevestigatorQ56A16.

Family and domain databases

Gene3D3.30.230.10. 1 hit.
3.40.50.300. 1 hit.
InterProIPR003959. ATPase_AAA_core.
IPR004815. Lon_bac/euk-typ.
IPR027065. Lon_Prtase.
IPR027417. P-loop_NTPase.
IPR008269. Pept_S16_C.
IPR008268. Peptidase_S16_AS.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR014721. Ribosomal_S5_D2-typ_fold_subgr.
[Graphical view]
PANTHERPTHR10046. PTHR10046. 1 hit.
PfamPF00004. AAA. 1 hit.
PF05362. Lon_C. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 1 hit.
SSF54211. SSF54211. 1 hit.
TIGRFAMsTIGR00763. lon. 1 hit.
PROSITEPS01046. LON_SER. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSLONP1. mouse.
SOURCESearch...

Entry information

Entry nameQ56A16_MOUSE
AccessionPrimary (citable) accession number: Q56A16
Entry history
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: April 16, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)