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Protein

Hemin-binding periplasmic protein HmuT

Gene

hmuT

Organism
Yersinia pestis
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Part of the binding-protein-dependent transport system for hemin.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Ion transport, Iron transport, Transport

Keywords - Ligandi

Iron

Protein family/group databases

TCDBi3.A.1.14.5. the atp-binding cassette (abc) superfamily.

Names & Taxonomyi

Protein namesi
Recommended name:
Hemin-binding periplasmic protein HmuT
Gene namesi
Name:hmuT
Ordered Locus Names:YPO0281, y0541, YP_0436
OrganismiYersinia pestis
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesYersiniaceaeYersinia
Proteomesi
  • UP000000815 Componenti: Chromosome
  • UP000001019 Componenti: Chromosome
  • UP000002490 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25Sequence analysisAdd BLAST25
ChainiPRO_000002144726 – 279Hemin-binding periplasmic protein HmuTAdd BLAST254

Proteomic databases

PRIDEiQ56991.

Interactioni

Protein-protein interaction databases

DIPiDIP-60002N.
IntActiQ56991. 1 interactor.
STRINGi187410.y0541.

Structurei

Secondary structure

1279
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi29 – 33Combined sources5
Helixi34 – 42Combined sources9
Helixi46 – 48Combined sources3
Beta strandi49 – 52Combined sources4
Helixi60 – 64Combined sources5
Helixi76 – 80Combined sources5
Beta strandi85 – 90Combined sources6
Helixi96 – 104Combined sources9
Beta strandi108 – 112Combined sources5
Helixi118 – 132Combined sources15
Helixi135 – 150Combined sources16
Beta strandi160 – 165Combined sources6
Beta strandi168 – 170Combined sources3
Beta strandi173 – 175Combined sources3
Beta strandi177 – 179Combined sources3
Helixi180 – 187Combined sources8
Beta strandi191 – 193Combined sources3
Beta strandi198 – 202Combined sources5
Helixi205 – 211Combined sources7
Beta strandi214 – 219Combined sources6
Helixi220 – 226Combined sources7
Helixi229 – 234Combined sources6
Helixi238 – 240Combined sources3
Helixi242 – 245Combined sources4
Beta strandi249 – 252Combined sources4
Helixi254 – 258Combined sources5
Helixi264 – 277Combined sources14

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3MD9X-ray1.50A/B26-279[»]
ProteinModelPortaliQ56991.
SMRiQ56991.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ56991.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini28 – 279Fe/B12 periplasmic-bindingPROSITE-ProRule annotationAdd BLAST252

Sequence similaritiesi

Contains 1 Fe/B12 periplasmic-binding domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4107R4I. Bacteria.
COG4558. LUCA.
HOGENOMiHOG000219574.
KOiK02016.
OMAiRDSTSQW.

Family and domain databases

InterProiIPR002491. ABC_transptr_periplasmic_BD.
[Graphical view]
PfamiPF01497. Peripla_BP_2. 1 hit.
[Graphical view]
PROSITEiPS50983. FE_B12_PBP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q56991-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLRLLSLPF ILSLCAPLLP LNTLAAERIV TIGGDVTEIA YALGAGDEIV
60 70 80 90 100
ARDSTSQQPQ AAQKLPDVGY MRTLNAEGIL AMKPTMLLVS ELAQPSLVLT
110 120 130 140 150
QIASSGVNVV TVPGQTTPES VAMKINAVAT ALHQTEKGQK LIEDYQQRLA
160 170 180 190 200
AVNKTPLPVK VLFVMSHGGL TPMAAGQNTA ADAMIRAAGG SNAMQGFSRY
210 220 230 240 250
RPLSQEGVIA SAPDLLLITT DGVKALGSSE NIWKLPGMAL TPAGKHKRLL
260 270
VVDDMALLGF GLETPQVLAQ LREKMEQMQ
Length:279
Mass (Da):29,574
Last modified:May 30, 2000 - v2
Checksum:i190547D960C93763
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U60647 Genomic DNA. Translation: AAC64868.1.
AL590842 Genomic DNA. Translation: CAL18967.1.
AE009952 Genomic DNA. Translation: AAM84129.1.
AE017042 Genomic DNA. Translation: AAS60707.1.
PIRiAE0035.
T12071.
RefSeqiWP_002209060.1. NZ_LQBA01000010.1.
YP_002345363.1. NC_003143.1.

Genome annotation databases

EnsemblBacteriaiAAM84129; AAM84129; y0541.
AAS60707; AAS60707; YP_0436.
GeneIDi1173127.
KEGGiype:YPO0281.
ypk:y0541.
ypm:YP_0436.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U60647 Genomic DNA. Translation: AAC64868.1.
AL590842 Genomic DNA. Translation: CAL18967.1.
AE009952 Genomic DNA. Translation: AAM84129.1.
AE017042 Genomic DNA. Translation: AAS60707.1.
PIRiAE0035.
T12071.
RefSeqiWP_002209060.1. NZ_LQBA01000010.1.
YP_002345363.1. NC_003143.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3MD9X-ray1.50A/B26-279[»]
ProteinModelPortaliQ56991.
SMRiQ56991.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

DIPiDIP-60002N.
IntActiQ56991. 1 interactor.
STRINGi187410.y0541.

Protein family/group databases

TCDBi3.A.1.14.5. the atp-binding cassette (abc) superfamily.

Proteomic databases

PRIDEiQ56991.

Protocols and materials databases

DNASUi1145488.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM84129; AAM84129; y0541.
AAS60707; AAS60707; YP_0436.
GeneIDi1173127.
KEGGiype:YPO0281.
ypk:y0541.
ypm:YP_0436.

Phylogenomic databases

eggNOGiENOG4107R4I. Bacteria.
COG4558. LUCA.
HOGENOMiHOG000219574.
KOiK02016.
OMAiRDSTSQW.

Miscellaneous databases

EvolutionaryTraceiQ56991.

Family and domain databases

InterProiIPR002491. ABC_transptr_periplasmic_BD.
[Graphical view]
PfamiPF01497. Peripla_BP_2. 1 hit.
[Graphical view]
PROSITEiPS50983. FE_B12_PBP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiHMUT_YERPE
AccessioniPrimary (citable) accession number: Q56991
Secondary accession number(s): Q0WK25
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: May 30, 2000
Last modified: November 2, 2016
This is version 120 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.