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Protein

Periplasmic chelated iron-binding protein YfeA

Gene

yfeA

Organism
Yersinia pestis
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Part of an ATP-driven transport system YfeABCD for chelated iron.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi76 – 761IronBy similarity
Metal bindingi141 – 1411IronBy similarity
Metal bindingi207 – 2071IronBy similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Ion transport, Iron transport, Transport

Keywords - Ligandi

Iron, Metal-binding

Enzyme and pathway databases

BioCyciYPES214092:GKDD-2409-MONOMER.

Protein family/group databases

TCDBi3.A.1.15.4. the atp-binding cassette (abc) superfamily.

Names & Taxonomyi

Protein namesi
Recommended name:
Periplasmic chelated iron-binding protein YfeA
Gene namesi
Name:yfeA
Ordered Locus Names:YPO2439, y1897, YP_2227
OrganismiYersinia pestis
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
Proteomesi
  • UP000000815 Componenti: Chromosome
  • UP000001019 Componenti: Chromosome
  • UP000002490 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3131Sequence analysisAdd
BLAST
Chaini32 – 311280Periplasmic chelated iron-binding protein YfeAPRO_0000031873Add
BLAST

Proteomic databases

PRIDEiQ56952.

Interactioni

Protein-protein interaction databases

STRINGi187410.y1897.

Structurei

3D structure databases

ProteinModelPortaliQ56952.
SMRiQ56952. Positions 37-309.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105DSE. Bacteria.
COG0803. LUCA.
HOGENOMiHOG000180310.
KOiK11604.
OMAiHAWQNVA.
OrthoDBiEOG6B3601.

Family and domain databases

InterProiIPR006129. AdhesinB.
IPR006128. Lipoprotein_4.
IPR006127. ZnuA-like.
[Graphical view]
PfamiPF01297. ZnuA. 1 hit.
[Graphical view]
PRINTSiPR00691. ADHESINB.
PR00690. ADHESNFAMILY.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q56952-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIERLNSPFL RAAALFTIVA FSSLISTAAL AENNPSDTAK KFKVVTTFTI
60 70 80 90 100
IQDIAQNIAG DVAVVESITK PGAEIHDYQP TPRDIVKAQS ADLILWNGMN
110 120 130 140 150
LERWFEKFFE SIKDVPSAVV TAGITPLPIR EGPYSGIANP HAWMSPSNAL
160 170 180 190 200
IYIENIRKAL VEHDPAHAET YNRNAQAYAE KIKALDAPLR ERLSRIPAEQ
210 220 230 240 250
RWLVTSEGAF SYLAKDYGFK EVYLWPINAE QQGIPQQVRH VIDIIRENKI
260 270 280 290 300
PVVFSESTIS DKPAKQVSKE TGAQYGGVLY VDSLSGEKGP VPTYISLINM
310
TVDTIAKGFG Q
Length:311
Mass (Da):34,389
Last modified:June 1, 2001 - v2
Checksum:i3C793D5B7BB45919
GO

Sequence cautioni

The sequence AAM85464.1 differs from that shown. Reason: Erroneous initiation. Curated
The sequence AAS62433.1 differs from that shown. Reason: Erroneous initiation. Curated
The sequence CAL21067.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U50597 Genomic DNA. Translation: AAC46147.1.
AL590842 Genomic DNA. Translation: CAL21067.1. Different initiation.
AE009952 Genomic DNA. Translation: AAM85464.1. Different initiation.
AE017042 Genomic DNA. Translation: AAS62433.1. Different initiation.
PIRiAH0297.
RefSeqiYP_002347403.1. NC_003143.1.

Genome annotation databases

EnsemblBacteriaiAAM85464; AAM85464; y1897.
AAS62433; AAS62433; YP_2227.
GeneIDi1175273.
KEGGiype:YPO2439.
ypk:y1897.
ypm:YP_2227.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U50597 Genomic DNA. Translation: AAC46147.1.
AL590842 Genomic DNA. Translation: CAL21067.1. Different initiation.
AE009952 Genomic DNA. Translation: AAM85464.1. Different initiation.
AE017042 Genomic DNA. Translation: AAS62433.1. Different initiation.
PIRiAH0297.
RefSeqiYP_002347403.1. NC_003143.1.

3D structure databases

ProteinModelPortaliQ56952.
SMRiQ56952. Positions 37-309.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi187410.y1897.

Protein family/group databases

TCDBi3.A.1.15.4. the atp-binding cassette (abc) superfamily.

Proteomic databases

PRIDEiQ56952.

Protocols and materials databases

DNASUi1146844.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAM85464; AAM85464; y1897.
AAS62433; AAS62433; YP_2227.
GeneIDi1175273.
KEGGiype:YPO2439.
ypk:y1897.
ypm:YP_2227.

Phylogenomic databases

eggNOGiENOG4105DSE. Bacteria.
COG0803. LUCA.
HOGENOMiHOG000180310.
KOiK11604.
OMAiHAWQNVA.
OrthoDBiEOG6B3601.

Enzyme and pathway databases

BioCyciYPES214092:GKDD-2409-MONOMER.

Family and domain databases

InterProiIPR006129. AdhesinB.
IPR006128. Lipoprotein_4.
IPR006127. ZnuA-like.
[Graphical view]
PfamiPF01297. ZnuA. 1 hit.
[Graphical view]
PRINTSiPR00691. ADHESINB.
PR00690. ADHESNFAMILY.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "An ABC transporter system of Yersinia pestis allows utilization of chelated iron by Escherichia coli SAB11."
    Bearden S.W., Staggs T.M., Perry R.D.
    J. Bacteriol. 180:1135-1147(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: KIM6.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CO-92 / Biovar Orientalis.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: KIM10+ / Biovar Mediaevalis.
  4. "Complete genome sequence of Yersinia pestis strain 91001, an isolate avirulent to humans."
    Song Y., Tong Z., Wang J., Wang L., Guo Z., Han Y., Zhang J., Pei D., Zhou D., Qin H., Pang X., Han Y., Zhai J., Li M., Cui B., Qi Z., Jin L., Dai R.
    , Chen F., Li S., Ye C., Du Z., Lin W., Wang J., Yu J., Yang H., Wang J., Huang P., Yang R.
    DNA Res. 11:179-197(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 91001 / Biovar Mediaevalis.

Entry informationi

Entry nameiYFEA_YERPE
AccessioniPrimary (citable) accession number: Q56952
Secondary accession number(s): Q0WE85
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 2001
Last sequence update: June 1, 2001
Last modified: May 11, 2016
This is version 112 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.