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Protein

Periplasmic chelated iron-binding protein YfeA

Gene

yfeA

Organism
Yersinia pestis
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Part of an ATP-driven transport system YfeABCD for chelated iron.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi76IronBy similarity1
Metal bindingi141IronBy similarity1
Metal bindingi207IronBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processIon transport, Iron transport, Transport
LigandIron, Metal-binding

Protein family/group databases

TCDBi3.A.1.15.4 the atp-binding cassette (abc) superfamily

Names & Taxonomyi

Protein namesi
Recommended name:
Periplasmic chelated iron-binding protein YfeA
Gene namesi
Name:yfeA
Ordered Locus Names:YPO2439, y1897, YP_2227
OrganismiYersinia pestis
Taxonomic identifieri632 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesYersiniaceaeYersinia
Proteomesi
  • UP000000815 Componenti: Chromosome
  • UP000001019 Componenti: Chromosome
  • UP000002490 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 31Sequence analysisAdd BLAST31
ChainiPRO_000003187332 – 311Periplasmic chelated iron-binding protein YfeAAdd BLAST280

Proteomic databases

PaxDbiQ56952

Interactioni

Protein-protein interaction databases

STRINGi187410.y1897

Structurei

Secondary structure

1311
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi42 – 48Combined sources7
Helixi49 – 59Combined sources11
Beta strandi62 – 69Combined sources8
Helixi82 – 89Combined sources8
Beta strandi92 – 96Combined sources5
Helixi105 – 109Combined sources5
Beta strandi117 – 119Combined sources3
Turni120 – 123Combined sources4
Turni133 – 136Combined sources4
Helixi142 – 144Combined sources3
Helixi146 – 163Combined sources18
Helixi165 – 167Combined sources3
Helixi168 – 194Combined sources27
Helixi198 – 200Combined sources3
Beta strandi202 – 208Combined sources7
Helixi211 – 217Combined sources7
Beta strandi220 – 230Combined sources11
Helixi237 – 248Combined sources12
Beta strandi252 – 256Combined sources5
Helixi262 – 270Combined sources9
Beta strandi274 – 279Combined sources6
Helixi294 – 308Combined sources15

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5UXSX-ray1.42A1-311[»]
5UXUX-ray1.84A1-311[»]
5UY0X-ray1.71A1-311[»]
5UY4X-ray1.92A1-311[»]
5UY5X-ray2.14A1-311[»]
5UYAX-ray1.72A1-311[»]
5UYBX-ray1.95A1-311[»]
5UYCX-ray1.96A1-311[»]
5UYDX-ray1.93A1-311[»]
5UYEX-ray2.09A1-311[»]
5UYFX-ray2.06A1-311[»]
5UYGX-ray1.86A1-311[»]
5UYHX-ray1.99A1-311[»]
5UYVX-ray1.69A1-311[»]
5UYWX-ray1.95A1-311[»]
ProteinModelPortaliQ56952
SMRiQ56952
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105DSE Bacteria
COG0803 LUCA
HOGENOMiHOG000180310
KOiK11604
OMAiDPHIWFD

Family and domain databases

InterProiView protein in InterPro
IPR006129 AdhesinB
IPR006128 Lipoprotein_4
IPR006127 ZnuA-like
PfamiView protein in Pfam
PF01297 ZnuA, 1 hit
PRINTSiPR00691 ADHESINB
PR00690 ADHESNFAMILY

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q56952-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIERLNSPFL RAAALFTIVA FSSLISTAAL AENNPSDTAK KFKVVTTFTI
60 70 80 90 100
IQDIAQNIAG DVAVVESITK PGAEIHDYQP TPRDIVKAQS ADLILWNGMN
110 120 130 140 150
LERWFEKFFE SIKDVPSAVV TAGITPLPIR EGPYSGIANP HAWMSPSNAL
160 170 180 190 200
IYIENIRKAL VEHDPAHAET YNRNAQAYAE KIKALDAPLR ERLSRIPAEQ
210 220 230 240 250
RWLVTSEGAF SYLAKDYGFK EVYLWPINAE QQGIPQQVRH VIDIIRENKI
260 270 280 290 300
PVVFSESTIS DKPAKQVSKE TGAQYGGVLY VDSLSGEKGP VPTYISLINM
310
TVDTIAKGFG Q
Length:311
Mass (Da):34,389
Last modified:June 1, 2001 - v2
Checksum:i3C793D5B7BB45919
GO

Sequence cautioni

The sequence AAM85464 differs from that shown. Reason: Erroneous initiation.Curated
The sequence AAS62433 differs from that shown. Reason: Erroneous initiation.Curated
The sequence CAL21067 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U50597 Genomic DNA Translation: AAC46147.1
AL590842 Genomic DNA Translation: CAL21067.1 Different initiation.
AE009952 Genomic DNA Translation: AAM85464.1 Different initiation.
AE017042 Genomic DNA Translation: AAS62433.1 Different initiation.
PIRiAH0297
RefSeqiYP_002347403.1, NC_003143.1

Genome annotation databases

EnsemblBacteriaiAAM85464; AAM85464; y1897
AAS62433; AAS62433; YP_2227
GeneIDi1175273
KEGGiype:YPO2439
ypk:y1897
ypm:YP_2227
PATRICifig|214092.21.peg.2850

Entry informationi

Entry nameiYFEA_YERPE
AccessioniPrimary (citable) accession number: Q56952
Secondary accession number(s): Q0WE85
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 1, 2001
Last sequence update: June 1, 2001
Last modified: May 23, 2018
This is version 124 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

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