Q568V6 (Q568V6_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Vox protein EMBL AAH92695.1

Gene names

Name:

vox ZFIN ZDB-GENE-010108-1

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH92695.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Otocephala › Ostariophysi › Otophysi › Cypriniphysi › Cypriniformes › Cyprinoidea › Cyprinidae › Danio

Protein attributes

Sequence length	265 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

General annotation (Comments)

Subcellular location

Nucleus By similarity RuleBase RU000682.

Ontologies

Keywords
Cellular component	Nucleus RuleBase RU000682 SAAS SAAS000047
Domain	Homeobox RuleBase RU000682 SAAS SAAS000047
Ligand	DNA-binding RuleBase RU000682 SAAS SAAS000047
Gene Ontology (GO)
Biological_process	dorsal/ventral pattern formation Inferred from genetic interaction PubMed 15269175PubMed 16216234PubMed 20950598. Source: ZFIN regulation of mesodermal cell fate specification Inferred from genetic interaction PubMed 20950598. Source: ZFIN
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro transcription regulatory region sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAH92695.1

Sequences

	Sequence		Length	Mass (Da)
	Q568V6 [UniParc]. Last modified May 10, 2005. Version 1. Checksum: 4188228979F34503	FASTA	265	30,726
	10 20 30 40 50 60 NTLGLYSDRF TSSNLREKKQ GEIMVKNFSV DWLAQSFHDS PVLEVQEPEK KTRPHVPCVV 70 80 90 100 110 120 QPRPPTSYDK VYLQPKPKIN KAELKTESSK ETPAQVTPRN CSSPSFSENS GYSSGYESEA 130 140 150 160 170 180 AASECASVED GHDAEKDGAT RRIRTKFTPE QIDKLEKIFN KHKYLDAGER VKTALKLGLS 190 200 210 220 230 240 ETQIRTWFQN RRMKLKREVQ EMRADFLLPQ MVLPPVIPVQ YQCYDRQRLP FPPHGPLVQQ 250 260 MMMPLHPHHP HPQHHQLMMP RHHYY

References

[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Embryo EMBL AAH92695.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC092695 mRNA. Translation: AAH92695.1.
IPI	IPI00629975.
UniGene	Dr.82511.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
ZFIN	ZDB-GENE-010108-1. vox.
Phylogenomic databases
HOGENOM	HOG000170671.
HOVERGEN	HBG098403.
InParanoid	Q568V6.
Family and domain databases
Gene3D	1.10.10.60. 1 hit.
InterPro	IPR001356. Homeodomain. IPR009057. Homeodomain-like. IPR000047. HTH_motif. [Graphical view]
Pfam	PF00046. Homeobox. 1 hit. [Graphical view]
PRINTS	PR00031. HTHREPRESSR.
SMART	SM00389. HOX. 1 hit. [Graphical view]
SUPFAM	SSF46689. Homeodomain_like. 1 hit.
PROSITE	PS50071. HOMEOBOX_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q568V6_DANRE

Accession

Primary (citable) accession number: Q568V6

Entry history

Integrated into UniProtKB/TrEMBL:	May 10, 2005
Last sequence update:	May 10, 2005
Last modified:	April 3, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)