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Protein

G patch domain-containing protein 4

Gene

Gpatch4

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
G patch domain-containing protein 4
Gene namesi
Name:Gpatch4
Synonyms:Gpatc4
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1311086. Gpatch4.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 407407G patch domain-containing protein 4PRO_0000287464Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei1 – 11N-acetylmethionineBy similarity
Modified residuei4 – 41PhosphothreonineBy similarity
Modified residuei116 – 1161PhosphothreonineBy similarity
Modified residuei128 – 1281PhosphoserineBy similarity
Modified residuei130 – 1301PhosphoserineBy similarity
Modified residuei258 – 2581PhosphoserineBy similarity

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiQ566R3.
PRIDEiQ566R3.

PTM databases

iPTMnetiQ566R3.

Expressioni

Gene expression databases

GenevisibleiQ566R3. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000053762.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini11 – 5747G-patchPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 G-patch domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG2809. Eukaryota.
ENOG4111IXK. LUCA.
GeneTreeiENSGT00390000008765.
HOGENOMiHOG000015182.
HOVERGENiHBG058275.
InParanoidiQ566R3.
OMAiKGQDPGA.
OrthoDBiEOG75QR4M.
PhylomeDBiQ566R3.
TreeFamiTF326721.

Family and domain databases

InterProiIPR000467. G_patch_dom.
[Graphical view]
PfamiPF01585. G-patch. 1 hit.
[Graphical view]
SMARTiSM00443. G_patch. 1 hit.
[Graphical view]
PROSITEiPS50174. G_PATCH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q566R3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVTPEVKSR GMKFAEEQLL KHGWTQGKGL GRKENGITQA LKVTLKQDTH
60 70 80 90 100
GVGHDPAKEF TDHWWSDLFN KTAANLVVDS GKDGVQIRRL SKETTQRSHS
110 120 130 140 150
KPSLLYQKFV KTATLTSGEE KPDRDLESCS DVDNREPIPP KILTDEMLLK
160 170 180 190 200
ACEGRTAHKA ARIGITMKAK LARLEAQEQA FLARLKGSKD VGTSQPLTDS
210 220 230 240 250
EPSQKKKKRR KQKEEEEAAT TEKSLGEELL EHTDKSFRKS KKKKKKKKDE
260 270 280 290 300
REGTAIGSEE EEAAGVCGPA ELSTEQSDQS SRKKKKRRRR HHEEEEEMGV
310 320 330 340 350
CDEGGRDVTG GPKAVNSGAD TDPWRSSKKR QTCEEDLDTQ DEEDKDDLTK
360 370 380 390 400
KERKVRKKDK KKRQQYCEEV LDVSNKDDGR TWEAEDGGER SQPHPKARAK

KKKRKTD
Length:407
Mass (Da):46,073
Last modified:May 10, 2005 - v1
Checksum:i7A2C233451EAA800
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC093381 mRNA. Translation: AAH93381.1.
RefSeqiNP_001020150.1. NM_001024979.1.
XP_008759351.1. XM_008761129.1.
XP_008759352.1. XM_008761130.1.
XP_008759353.1. XM_008761131.1.
XP_008759354.1. XM_008761132.1.
UniGeneiRn.20166.

Genome annotation databases

EnsembliENSRNOT00000056923; ENSRNOP00000053762; ENSRNOG00000018969.
GeneIDi295228.
KEGGirno:295228.
UCSCiRGD:1311086. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC093381 mRNA. Translation: AAH93381.1.
RefSeqiNP_001020150.1. NM_001024979.1.
XP_008759351.1. XM_008761129.1.
XP_008759352.1. XM_008761130.1.
XP_008759353.1. XM_008761131.1.
XP_008759354.1. XM_008761132.1.
UniGeneiRn.20166.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000053762.

PTM databases

iPTMnetiQ566R3.

Proteomic databases

PaxDbiQ566R3.
PRIDEiQ566R3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000056923; ENSRNOP00000053762; ENSRNOG00000018969.
GeneIDi295228.
KEGGirno:295228.
UCSCiRGD:1311086. rat.

Organism-specific databases

CTDi54865.
RGDi1311086. Gpatch4.

Phylogenomic databases

eggNOGiKOG2809. Eukaryota.
ENOG4111IXK. LUCA.
GeneTreeiENSGT00390000008765.
HOGENOMiHOG000015182.
HOVERGENiHBG058275.
InParanoidiQ566R3.
OMAiKGQDPGA.
OrthoDBiEOG75QR4M.
PhylomeDBiQ566R3.
TreeFamiTF326721.

Miscellaneous databases

PROiQ566R3.

Gene expression databases

GenevisibleiQ566R3. RN.

Family and domain databases

InterProiIPR000467. G_patch_dom.
[Graphical view]
PfamiPF01585. G-patch. 1 hit.
[Graphical view]
SMARTiSM00443. G_patch. 1 hit.
[Graphical view]
PROSITEiPS50174. G_PATCH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Thymus.

Entry informationi

Entry nameiGPTC4_RAT
AccessioniPrimary (citable) accession number: Q566R3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: May 10, 2005
Last modified: June 8, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.