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Protein

G patch domain-containing protein 4

Gene

Gpatch4

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
G patch domain-containing protein 4
Gene namesi
Name:Gpatch4
Synonyms:Gpatc4
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1311086. Gpatch4.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002874641 – 407G patch domain-containing protein 4Add BLAST407

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei1N-acetylmethionineBy similarity1
Modified residuei4PhosphothreonineBy similarity1
Cross-linki46Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)By similarity
Modified residuei116PhosphothreonineBy similarity1
Modified residuei128PhosphoserineBy similarity1
Modified residuei130PhosphoserineBy similarity1
Modified residuei258PhosphoserineBy similarity1

Keywords - PTMi

Acetylation, Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

PaxDbiQ566R3.
PRIDEiQ566R3.

PTM databases

iPTMnetiQ566R3.
PhosphoSitePlusiQ566R3.

Expressioni

Gene expression databases

BgeeiENSRNOG00000018969.
GenevisibleiQ566R3. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000053762.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 57G-patchPROSITE-ProRule annotationAdd BLAST47

Phylogenomic databases

eggNOGiKOG2809. Eukaryota.
ENOG4111IXK. LUCA.
GeneTreeiENSGT00390000008765.
HOGENOMiHOG000015182.
HOVERGENiHBG058275.
InParanoidiQ566R3.
OMAiKGQDPGA.
OrthoDBiEOG091G0N9N.
PhylomeDBiQ566R3.
TreeFamiTF326721.

Family and domain databases

InterProiView protein in InterPro
IPR000467. G_patch_dom.
PfamiView protein in Pfam
PF01585. G-patch. 1 hit.
SMARTiView protein in SMART
SM00443. G_patch. 1 hit.
PROSITEiView protein in PROSITE
PS50174. G_PATCH. 1 hit.

Sequencei

Sequence statusi: Complete.

Q566R3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVTPEVKSR GMKFAEEQLL KHGWTQGKGL GRKENGITQA LKVTLKQDTH
60 70 80 90 100
GVGHDPAKEF TDHWWSDLFN KTAANLVVDS GKDGVQIRRL SKETTQRSHS
110 120 130 140 150
KPSLLYQKFV KTATLTSGEE KPDRDLESCS DVDNREPIPP KILTDEMLLK
160 170 180 190 200
ACEGRTAHKA ARIGITMKAK LARLEAQEQA FLARLKGSKD VGTSQPLTDS
210 220 230 240 250
EPSQKKKKRR KQKEEEEAAT TEKSLGEELL EHTDKSFRKS KKKKKKKKDE
260 270 280 290 300
REGTAIGSEE EEAAGVCGPA ELSTEQSDQS SRKKKKRRRR HHEEEEEMGV
310 320 330 340 350
CDEGGRDVTG GPKAVNSGAD TDPWRSSKKR QTCEEDLDTQ DEEDKDDLTK
360 370 380 390 400
KERKVRKKDK KKRQQYCEEV LDVSNKDDGR TWEAEDGGER SQPHPKARAK

KKKRKTD
Length:407
Mass (Da):46,073
Last modified:May 10, 2005 - v1
Checksum:i7A2C233451EAA800
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC093381 mRNA. Translation: AAH93381.1.
RefSeqiNP_001020150.1. NM_001024979.1.
XP_008759351.1. XM_008761129.1.
XP_008759352.1. XM_008761130.2.
XP_008759353.1. XM_008761131.2.
XP_008759354.1. XM_008761132.2.
UniGeneiRn.20166.

Genome annotation databases

EnsembliENSRNOT00000056923; ENSRNOP00000053762; ENSRNOG00000018969.
GeneIDi295228.
KEGGirno:295228.
UCSCiRGD:1311086. rat.

Similar proteinsi

Entry informationi

Entry nameiGPTC4_RAT
AccessioniPrimary (citable) accession number: Q566R3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: May 10, 2005
Last modified: November 22, 2017
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome