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Q56686

- CPDP_ALIFS

UniProt

Q56686 - CPDP_ALIFS

Protein

3',5'-cyclic-nucleotide phosphodiesterase

Gene

cpdP

Organism
Aliivibrio fischeri (Vibrio fischeri)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (01 Nov 1996)
      Previous versions | rss
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    Functioni

    Seems to allow the organism to grow on cAMP.

    Catalytic activityi

    Nucleoside 3',5'-cyclic phosphate + H2O = nucleoside 5'-phosphate.

    GO - Molecular functioni

    1. 3',5'-cyclic-AMP phosphodiesterase activity Source: InterPro

    GO - Biological processi

    1. cAMP catabolic process Source: InterPro

    Keywords - Molecular functioni

    Hydrolase

    Keywords - Ligandi

    cAMP

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    3',5'-cyclic-nucleotide phosphodiesterase (EC:3.1.4.17)
    Short name:
    3':5'-CNP
    Short name:
    PDEase
    Gene namesi
    Name:cpdP
    OrganismiAliivibrio fischeri (Vibrio fischeri)
    Taxonomic identifieri668 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeAliivibrio

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Periplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2222Sequence AnalysisAdd
    BLAST
    Chaini23 – 3303083',5'-cyclic-nucleotide phosphodiesterasePRO_0000023354Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliQ56686.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Signal

    Family and domain databases

    Gene3Di3.60.15.10. 1 hit.
    InterProiIPR001279. Beta-lactamas-like.
    IPR024225. cAMP-PdiesteraseII_CS.
    IPR000396. Pdiesterase2.
    [Graphical view]
    PfamiPF02112. PDEase_II. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000962. Cyc_nuc_PDEase. 1 hit.
    PRINTSiPR00388. PDIESTERASE2.
    SMARTiSM00849. Lactamase_B. 1 hit.
    [Graphical view]
    SUPFAMiSSF56281. SSF56281. 1 hit.
    PROSITEiPS00607. PDEASE_II. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q56686-1 [UniParc]FASTAAdd to Basket

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    MFKNKLAVLF TCLSVFSFSA QSGSFDTVTL GSKGGIQDGN LTAFLIKSEA    50
    DSNFVMLDAG SVVNGLIVSE QKGAFKDITV PDSSPYTKVG YLLKDRIKGY 100
    FISHAHLDHV AGLIISSPDD SKKPIYGLAA TNKDLMKNYF NWSAWPNFGN 150
    KGEGFKLNKY NYVDLQPGVW SPVAETTMSV VSLPLSHSGG QSTVFILKDS 200
    EGDVFAYFGD TGPDEVEKSS AMRTAWSVLA PFVKQGKLKG IIIEVSFTNE 250
    TPDKSLFGHL TPNWLVKELS VLEDMNGKGS LKDLNVAISH IKYSLKNSED 300
    PKVIIKKQLV EVNDLGVNFI FPEQGDSLQF 330
    Length:330
    Mass (Da):36,089
    Last modified:November 1, 1996 - v1
    Checksum:iB87127EE2CE213D4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L11527 Genomic DNA. Translation: AAA27513.1.
    PIRiA40602.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    L11527 Genomic DNA. Translation: AAA27513.1 .
    PIRi A40602.

    3D structure databases

    ProteinModelPortali Q56686.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    Gene3Di 3.60.15.10. 1 hit.
    InterProi IPR001279. Beta-lactamas-like.
    IPR024225. cAMP-PdiesteraseII_CS.
    IPR000396. Pdiesterase2.
    [Graphical view ]
    Pfami PF02112. PDEase_II. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000962. Cyc_nuc_PDEase. 1 hit.
    PRINTSi PR00388. PDIESTERASE2.
    SMARTi SM00849. Lactamase_B. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56281. SSF56281. 1 hit.
    PROSITEi PS00607. PDEASE_II. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Characterization of a periplasmic 3':5'-cyclic nucleotide phosphodiesterase gene, cpdP, from the marine symbiotic bacterium Vibrio fischeri."
      Dunlap P.V., Callahan S.M.
      J. Bacteriol. 175:4615-4624(1993) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: MJ-1.

    Entry informationi

    Entry nameiCPDP_ALIFS
    AccessioniPrimary (citable) accession number: Q56686
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 30, 2000
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3