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Protein
Submitted name:

SleepleSS (Drosophila) Homolog

Gene

sssh-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
SleepleSS (Drosophila) HomologImported
Gene namesi
Name:sssh-1Imported
ORF Names:CELE_F31F6.8Imported, F31F6.8Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiF31F6.8; CE38336; WBGene00044138; sssh-1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence analysisAdd
BLAST
Chaini20 – 155136Sequence analysisPRO_5005696041Add
BLAST

Proteomic databases

PaxDbiQ565B0.

Structurei

3D structure databases

ProteinModelPortaliQ565B0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini74 – 13966Activin_recpInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili151 – 1555Sequence analysis

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410JMVB. Eukaryota.
ENOG4111CTW. LUCA.
HOGENOMiHOG000076934.
InParanoidiQ565B0.
OMAiTIDANAM.
OrthoDBiEOG7GFB6T.

Family and domain databases

InterProiIPR000472. Activin_recp.
[Graphical view]
PfamiPF01064. Activin_recp. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q565B0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSAIFMASV FSLITVVKSQ DIRCYACTTI DANAMLSEIS DPNWLRWLEN
60 70 80 90 100
VRYVPFSQKC IDYFEVDQAL RDGVRSNECS NGVCMKMIFQ EKSGINHVWR
110 120 130 140 150
SCIPNAKEQI RSDCTKITSG EGNLEVCTCD GNLCNNDVNL NLILIIMFSA

AVLLL
Length:155
Mass (Da):17,391
Last modified:May 10, 2005 - v1
Checksum:iAE3D06CCBF5994CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CAI79224.1.
RefSeqiNP_001024623.1. NM_001029452.1.
UniGeneiCel.30300.

Genome annotation databases

EnsemblMetazoaiF31F6.8; F31F6.8; WBGene00044138.
GeneIDi3565973.
KEGGicel:CELE_F31F6.8.
UCSCiF31F6.8. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284606 Genomic DNA. Translation: CAI79224.1.
RefSeqiNP_001024623.1. NM_001029452.1.
UniGeneiCel.30300.

3D structure databases

ProteinModelPortaliQ565B0.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiQ565B0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF31F6.8; F31F6.8; WBGene00044138.
GeneIDi3565973.
KEGGicel:CELE_F31F6.8.
UCSCiF31F6.8. c. elegans.

Organism-specific databases

CTDi3565973.
WormBaseiF31F6.8; CE38336; WBGene00044138; sssh-1.

Phylogenomic databases

eggNOGiENOG410JMVB. Eukaryota.
ENOG4111CTW. LUCA.
HOGENOMiHOG000076934.
InParanoidiQ565B0.
OMAiTIDANAM.
OrthoDBiEOG7GFB6T.

Miscellaneous databases

NextBioi958585.

Family and domain databases

InterProiIPR000472. Activin_recp.
[Graphical view]
PfamiPF01064. Activin_recp. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ565B0_CAEEL
AccessioniPrimary (citable) accession number: Q565B0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: December 9, 2015
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.