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Protein

Flagellin D

Gene

flaD

Organism
Vibrio anguillarum (Listonella anguillarum)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. FlaD is not essential for flagellar synthesis and motility. May have a role in virulence unrelated to motility.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Virulence

Names & Taxonomyi

Protein namesi
Recommended name:
Flagellin D
Gene namesi
Name:flaD
OrganismiVibrio anguillarum (Listonella anguillarum)
Taxonomic identifieri55601 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Bacterial flagellum, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001826462 – 377Flagellin DAdd BLAST376

Interactioni

Subunit structurei

Heteropolymer of multiple flagellin subunits including FlaA, FlaB, FlaC, FlaD and possibly FlaE.

Protein-protein interaction databases

STRINGi882102.VAA_03469.

Structurei

3D structure databases

ProteinModelPortaliQ56571.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili104 – 128Sequence analysisAdd BLAST25

Sequence similaritiesi

Belongs to the bacterial flagellin family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG4105I03. Bacteria.
COG1344. LUCA.
KOiK02406.

Family and domain databases

Gene3Di1.20.1330.10. 2 hits.
InterProiIPR001492. Flagellin.
IPR001029. Flagellin_D0/D1.
IPR010810. Flagellin_hook_IN_motif.
[Graphical view]
PfamiPF00700. Flagellin_C. 1 hit.
PF07196. Flagellin_IN. 1 hit.
PF00669. Flagellin_N. 1 hit.
[Graphical view]
PRINTSiPR00207. FLAGELLIN.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q56571-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVNVNTNVS AMTAQRYLNG ASNAQQTSME RLSSGFKINS AKDDAAGLQI
60 70 80 90 100
SNRLNVQSRG LDVAVRNAND GISIAQTAEG AMNETTNILQ RMRDLSLQSA
110 120 130 140 150
NGSNSKADRV AIQEEVTALN DELNRIAETT SFGGNKLLNG TFETKSFQIG
160 170 180 190 200
ADNGEAVMLS LNNMRSDNAM MGGTSYQAAN GKDKDWSVQA GSNDLQITLK
210 220 230 240 250
DTSGTDQTIN ISAKEGDDIE ELATYINGQT DMVKASVDDE GKLQVFAGSN
260 270 280 290 300
KVEGPVTFAG GLAGELGMQA GQAVTVDVID VTSVGGAQES VAIVDAALQF
310 320 330 340 350
VDSHRAQLGA FQNRFSHAIS NLDNINENVS ASKSRIKDTD FAKETTALTK
360 370
SQILSQASSS VLAQAKQAPQ AALSLLG
Length:377
Mass (Da):39,641
Last modified:January 23, 2007 - v3
Checksum:i547684BAC6A5C055
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U52198 Genomic DNA. Translation: AAB09434.1.
RefSeqiWP_013856299.1. NZ_LK021130.1.

Genome annotation databases

GeneIDi10774842.
KEGGivau:VANGNB10_cI1949c.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U52198 Genomic DNA. Translation: AAB09434.1.
RefSeqiWP_013856299.1. NZ_LK021130.1.

3D structure databases

ProteinModelPortaliQ56571.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi882102.VAA_03469.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi10774842.
KEGGivau:VANGNB10_cI1949c.

Phylogenomic databases

eggNOGiENOG4105I03. Bacteria.
COG1344. LUCA.
KOiK02406.

Family and domain databases

Gene3Di1.20.1330.10. 2 hits.
InterProiIPR001492. Flagellin.
IPR001029. Flagellin_D0/D1.
IPR010810. Flagellin_hook_IN_motif.
[Graphical view]
PfamiPF00700. Flagellin_C. 1 hit.
PF07196. Flagellin_IN. 1 hit.
PF00669. Flagellin_N. 1 hit.
[Graphical view]
PRINTSiPR00207. FLAGELLIN.
ProtoNetiSearch...

Entry informationi

Entry nameiFLAD_VIBAN
AccessioniPrimary (citable) accession number: Q56571
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 16, 2001
Last sequence update: January 23, 2007
Last modified: October 5, 2016
This is version 82 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Direct protein sequencing

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.