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Protein
Submitted name:

Tropomyosin 1, alpha

Gene

Tpm1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Tropomyosin 1, alphaImported
Submitted name:
Tropomyosin 1, alpha, isoform CRA_aImported
Gene namesi
Name:Tpm1Imported
ORF Names:mCG_1234Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:98809. Tpm1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

MaxQBiQ564G1.

Expressioni

Gene expression databases

BgeeiENSMUSG00000032366.

Structurei

3D structure databases

SMRiQ564G1. Positions 1-284.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili1 – 273273Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the tropomyosin family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysisSAAS annotation

Phylogenomic databases

HOVERGENiHBG107404.

Family and domain databases

InterProiIPR000533. Tropomyosin.
[Graphical view]
PfamiPF00261. Tropomyosin. 1 hit.
[Graphical view]
PRINTSiPR00194. TROPOMYOSIN.
PROSITEiPS00326. TROPOMYOSIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q564G1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDAIKKKMQM LKLDKENALD RAEQAEADKK AAEDRSKQLE DELVSLQKKL
60 70 80 90 100
KGTEDELDKY SEALKDAQEK LELAEKKATD AEADVASLNR RIQLVEEELD
110 120 130 140 150
RAQERLATAL QKLEEAEKAA DESERGMKVI ESRAQKDEEK MEIQEIQLKE
160 170 180 190 200
AKHIAEDADR KYEEVARKLV IIESDLERAE ERAELSEGKC AELEEELKTV
210 220 230 240 250
TNNLKSLEAQ AEKYSQKEDK YEEEIKVLSD KLKEAETRAE FAERSVTKLE
260 270 280
KSIDDLEEKV AHAKEENLSM HQMLDQTLLE LNNM
Length:284
Mass (Da):32,709
Last modified:May 10, 2005 - v1
Checksum:iCD755ABFAEA04540
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC132035 mRNA. Translation: AAI32036.1.
BC132037 mRNA. Translation: AAI32038.1.
AK003175 mRNA. Translation: BAB22620.1.
CH466522 Genomic DNA. Translation: EDL26140.1.
RefSeqiNP_077745.2. NM_024427.4.
UniGeneiMm.121878.

Genome annotation databases

GeneIDi22003.
UCSCiuc009qfp.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC132035 mRNA. Translation: AAI32036.1.
BC132037 mRNA. Translation: AAI32038.1.
AK003175 mRNA. Translation: BAB22620.1.
CH466522 Genomic DNA. Translation: EDL26140.1.
RefSeqiNP_077745.2. NM_024427.4.
UniGeneiMm.121878.

3D structure databases

SMRiQ564G1. Positions 1-284.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiQ564G1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi22003.
UCSCiuc009qfp.1. mouse.

Organism-specific databases

CTDi7168.
MGIiMGI:98809. Tpm1.

Phylogenomic databases

HOVERGENiHBG107404.

Miscellaneous databases

ChiTaRSiTpm1. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000032366.

Family and domain databases

InterProiIPR000533. Tropomyosin.
[Graphical view]
PfamiPF00261. Tropomyosin. 1 hit.
[Graphical view]
PRINTSiPR00194. TROPOMYOSIN.
PROSITEiPS00326. TROPOMYOSIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ564G1_MOUSE
AccessioniPrimary (citable) accession number: Q564G1
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: September 7, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.