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Protein
Submitted name:

Ribosomal protein L4

Gene

Rpl4

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal protein L4Imported
Gene namesi
Name:Rpl4Imported
ORF Names:mCG_12784Imported
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1915141. Rpl4.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

TopDownProteomicsiQ564E8.

Expressioni

Gene expression databases

BgeeiENSMUSG00000032399.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000034966.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini275 – 34874Ribos_L4_asso_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1475. Eukaryota.
COG0088. LUCA.
HOVERGENiHBG001453.
KOiK02930.
OMAiHAVNTKA.
OrthoDBiEOG091G0A2I.

Family and domain databases

Gene3Di3.40.1370.10. 1 hit.
InterProiIPR025755. Ribos_L4_C_dom.
IPR002136. Ribosomal_L4/L1e.
IPR013000. Ribosomal_L4/L1e_euk/arc_CS.
IPR023574. Ribosomal_L4_dom.
[Graphical view]
PfamiPF14374. Ribos_L4_asso_C. 1 hit.
PF00573. Ribosomal_L4. 1 hit.
[Graphical view]
SUPFAMiSSF52166. SSF52166. 1 hit.
PROSITEiPS00939. RIBOSOMAL_L1E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q564E8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MACARPLISV YSEKGESSGK NVTLPAVFKA PIRPDIVNFV HTNLRKNNRQ
60 70 80 90 100
PYAVSELAGH QTSAESWGTG RAVARIPRVR GGGTHRSGQG AFGNMCRGGR
110 120 130 140 150
MFAPTKTWRR WHRRVNTTQK RYAICSALAA SALPALVMSK GHRIEEVPEL
160 170 180 190 200
PLVVEDKVEG YKKTKEAVQL LKKLKAWNDI KKVYASQRMR AGKGKMRNRR
210 220 230 240 250
RIQRRGPCII YNEDNGIIKA FRNIPGITLL NVSKLNILKL APGGHVGRFC
260 270 280 290 300
IWTESAFRKL DELYGTWRKA ASLKSNYNLP MHKMMNTDLS RILKSPEIQR
310 320 330 340 350
ALRAPRKKIH RRVLKKNPLK NLRIMLKLNP YAKTMRRNTI LRQARNHKLR
360 370 380 390 400
VKKLEAAATA LATKSEKVVP EKGTADKKPA VGKKGKKVDA KKQKPAGKKV
410
VAKKPAEKKP TTEEKKPAA
Length:419
Mass (Da):47,154
Last modified:May 10, 2005 - v1
Checksum:iE736E656A60BE85B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC094036 mRNA. Translation: AAH94036.1.
BC132321 mRNA. Translation: AAI32322.1.
BC132323 mRNA. Translation: AAI32324.1.
AK088279 mRNA. Translation: BAC40254.1.
AK141433 mRNA. Translation: BAE24683.1.
AK165962 mRNA. Translation: BAE38489.1.
AK166748 mRNA. Translation: BAE38990.1.
AK166957 mRNA. Translation: BAE39140.1.
AK167054 mRNA. Translation: BAE39218.1.
CH466522 Genomic DNA. Translation: EDL26056.1.
RefSeqiNP_077174.1. NM_024212.4.
UniGeneiMm.280083.

Genome annotation databases

GeneIDi67891.
KEGGimmu:67891.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC094036 mRNA. Translation: AAH94036.1.
BC132321 mRNA. Translation: AAI32322.1.
BC132323 mRNA. Translation: AAI32324.1.
AK088279 mRNA. Translation: BAC40254.1.
AK141433 mRNA. Translation: BAE24683.1.
AK165962 mRNA. Translation: BAE38489.1.
AK166748 mRNA. Translation: BAE38990.1.
AK166957 mRNA. Translation: BAE39140.1.
AK167054 mRNA. Translation: BAE39218.1.
CH466522 Genomic DNA. Translation: EDL26056.1.
RefSeqiNP_077174.1. NM_024212.4.
UniGeneiMm.280083.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000034966.

Proteomic databases

TopDownProteomicsiQ564E8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi67891.
KEGGimmu:67891.

Organism-specific databases

CTDi6124.
MGIiMGI:1915141. Rpl4.

Phylogenomic databases

eggNOGiKOG1475. Eukaryota.
COG0088. LUCA.
HOVERGENiHBG001453.
KOiK02930.
OMAiHAVNTKA.
OrthoDBiEOG091G0A2I.

Miscellaneous databases

ChiTaRSiRpl4. mouse.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000032399.

Family and domain databases

Gene3Di3.40.1370.10. 1 hit.
InterProiIPR025755. Ribos_L4_C_dom.
IPR002136. Ribosomal_L4/L1e.
IPR013000. Ribosomal_L4/L1e_euk/arc_CS.
IPR023574. Ribosomal_L4_dom.
[Graphical view]
PfamiPF14374. Ribos_L4_asso_C. 1 hit.
PF00573. Ribosomal_L4. 1 hit.
[Graphical view]
SUPFAMiSSF52166. SSF52166. 1 hit.
PROSITEiPS00939. RIBOSOMAL_L1E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ564E8_MOUSE
AccessioniPrimary (citable) accession number: Q564E8
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: September 7, 2016
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Proteomics identificationCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.