Q562A0 (Q562A0_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Arl6ip2 protein EMBL AAH92650.1

Gene names

Name:	Atl2 RGD 1305125
Synonyms:	Arl6ip2 EMBL AAH92650.1 RGD 1305125

Organism

Rattus norvegicus (Rat) EMBL AAH92650.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	144 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

Ontologies

Gene Ontology (GO)
Biological_process	Golgi organization Inferred from electronic annotation. Source: Compara endoplasmic reticulum organization Inferred from electronic annotation. Source: Compara protein homooligomerization Inferred from electronic annotation. Source: Compara
Cellular_component	endoplasmic reticulum Inferred from electronic annotation. Source: Compara integral to membrane Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL AAH92650.1

Sequences

	Sequence		Length	Mass (Da)
	Q562A0 [UniParc]. Last modified May 10, 2005. Version 1. Checksum: E7F555DC7CA16086	FASTA	144	16,235
	10 20 30 40 50 60 FCRRYQDQLE AEIEETYANF IKHNDGKNIF YAARTPATLF AVMFAMYIIS GLTGFIGLNS 70 80 90 100 110 120 IAVLCNLVMG LALTSLCTWA YVKYSGEFRE IGTMIDQVAE TLWEQVLKPL GDNLMEENIR 130 140 QSVTNSIKAG LTDQVSHHAR LKTD

References

[1]

"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J. Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Brain EMBL AAH92650.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BC092650 mRNA. Translation: AAH92650.1.
IPI	IPI00915549.
RefSeq	NP_001094141.1. NM_001100671.1.
UniGene	Rn.203081.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	10116.ENSRNOP00000008988.
Proteomic databases
PaxDb	Q562A0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	298757.
KEGG	rno:298757.
UCSC	RGD:1305125. rat.
Organism-specific databases
CTD	64225.
RGD	1305125. Atl2.
Phylogenomic databases
eggNOG	NOG325148.
HOGENOM	HOG000234332.
HOVERGEN	HBG106484.
InParanoid	Q562A0.
OrthoDB	EOG4255SJ.
Gene expression databases
ArrayExpress	Q562A0.
Genevestigator	Q562A0.
Family and domain databases
ProtoNet	Search...
Other
NextBio	644280.

Entry information

Entry name

Q562A0_RAT

Accession

Primary (citable) accession number: Q562A0

Entry history

Integrated into UniProtKB/TrEMBL:	May 10, 2005
Last sequence update:	May 10, 2005
Last modified:	May 29, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)