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Q562A0

- Q562A0_RAT

UniProt

Q562A0 - Q562A0_RAT

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Protein
Submitted name:

Arl6ip2 protein

Gene

Atl2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  1. endoplasmic reticulum organization Source: Ensembl
  2. Golgi organization Source: Ensembl
  3. protein homooligomerization Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Arl6ip2 proteinImported
Gene namesi
Name:Atl2Imported
Synonyms:Arl6ip2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi1305125. Atl2.

Subcellular locationi

GO - Cellular componenti

  1. endoplasmic reticulum Source: Ensembl
  2. integral component of membrane Source: Ensembl
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ562A0.

Expressioni

Gene expression databases

ExpressionAtlasiQ562A0. baseline.
GenevestigatoriQ562A0.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000008988.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG325148.
HOGENOMiHOG000234332.
HOVERGENiHBG106484.
KOiK17339.

Sequencei

Sequence statusi: Fragment.

Q562A0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
FCRRYQDQLE AEIEETYANF IKHNDGKNIF YAARTPATLF AVMFAMYIIS
60 70 80 90 100
GLTGFIGLNS IAVLCNLVMG LALTSLCTWA YVKYSGEFRE IGTMIDQVAE
110 120 130 140
TLWEQVLKPL GDNLMEENIR QSVTNSIKAG LTDQVSHHAR LKTD
Length:144
Mass (Da):16,235
Last modified:May 10, 2005 - v1
Checksum:iE7F555DC7CA16086
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC092650 mRNA. Translation: AAH92650.1.
RefSeqiNP_001094141.1. NM_001100671.1.
UniGeneiRn.203081.

Genome annotation databases

GeneIDi298757.
KEGGirno:298757.
UCSCiRGD:1305125. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC092650 mRNA. Translation: AAH92650.1 .
RefSeqi NP_001094141.1. NM_001100671.1.
UniGenei Rn.203081.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000008988.

Proteomic databases

PaxDbi Q562A0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 298757.
KEGGi rno:298757.
UCSCi RGD:1305125. rat.

Organism-specific databases

CTDi 64225.
RGDi 1305125. Atl2.

Phylogenomic databases

eggNOGi NOG325148.
HOGENOMi HOG000234332.
HOVERGENi HBG106484.
KOi K17339.

Miscellaneous databases

NextBioi 644280.

Gene expression databases

ExpressionAtlasi Q562A0. baseline.
Genevestigatori Q562A0.

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: BrainImported.

Entry informationi

Entry nameiQ562A0_RAT
AccessioniPrimary (citable) accession number: Q562A0
Entry historyi
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: October 29, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)