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Q562A0 (Q562A0_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Atl2 RGD 1305125
Synonyms:Arl6ip2 EMBL AAH92650.1 RGD 1305125
OrganismRattus norvegicus (Rat) EMBL AAH92650.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length144 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL AAH92650.1

Sequences

Sequence LengthMass (Da)Tools
Q562A0 [UniParc].

Last modified May 10, 2005. Version 1.
Checksum: E7F555DC7CA16086

FASTA14416,235
        10         20         30         40         50         60 
FCRRYQDQLE AEIEETYANF IKHNDGKNIF YAARTPATLF AVMFAMYIIS GLTGFIGLNS 

        70         80         90        100        110        120 
IAVLCNLVMG LALTSLCTWA YVKYSGEFRE IGTMIDQVAE TLWEQVLKPL GDNLMEENIR 

       130        140 
QSVTNSIKAG LTDQVSHHAR LKTD 

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Brain EMBL AAH92650.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC092650 mRNA. Translation: AAH92650.1.
RefSeqNP_001094141.1. NM_001100671.1.
UniGeneRn.203081.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING10116.ENSRNOP00000008988.

Proteomic databases

PaxDbQ562A0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID298757.
KEGGrno:298757.
UCSCRGD:1305125. rat.

Organism-specific databases

CTD64225.
RGD1305125. Atl2.

Phylogenomic databases

eggNOGNOG325148.
HOGENOMHOG000234332.
HOVERGENHBG106484.
InParanoidQ562A0.
KOK17339.

Gene expression databases

GenevestigatorQ562A0.

Family and domain databases

ProtoNetSearch...

Other

NextBio644280.

Entry information

Entry nameQ562A0_RAT
AccessionPrimary (citable) accession number: Q562A0
Entry history
Integrated into UniProtKB/TrEMBL: May 10, 2005
Last sequence update: May 10, 2005
Last modified: April 16, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)