Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q55GH4

- GYS_DICDI

UniProt

Q55GH4 - GYS_DICDI

Protein

Glycogen [starch] synthase

Gene

glcS

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (24 May 2005)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Transfers the glycosyl residue from UDPG to the non-reducing end of alpha-1,4-glucan.1 Publication

    Catalytic activityi

    UDP-alpha-D-glucose + ((1->4)-alpha-D-glucosyl)(n) = UDP + ((1->4)-alpha-D-glucosyl)(n+1).

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei61 – 611UDP-glucoseBy similarity

    GO - Molecular functioni

    1. glycogen (starch) synthase activity Source: dictyBase

    GO - Biological processi

    1. autophagic vacuole assembly Source: dictyBase
    2. glycogen biosynthetic process Source: dictyBase

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    UniPathwayiUPA00164.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycogen [starch] synthase (EC:2.4.1.11)
    Gene namesi
    Name:glcS
    ORF Names:DDB_G0267674
    OrganismiDictyostelium discoideum (Slime mold)
    Taxonomic identifieri44689 [NCBI]
    Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium
    ProteomesiUP000002195: Chromosome 1, UP000002195: Unassembled WGS sequence

    Organism-specific databases

    dictyBaseiDDB_G0267674. glcS.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 878878Glycogen [starch] synthasePRO_0000355639Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi44689.DDB_0231962.

    Structurei

    3D structure databases

    ProteinModelPortaliQ55GH4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi666 – 67510Poly-Gln
    Compositional biasi693 – 861169Thr-richAdd
    BLAST

    Sequence similaritiesi

    Belongs to the glycosyltransferase 3 family.Curated

    Phylogenomic databases

    eggNOGiCOG0438.
    KOiK00693.
    OMAiYIAHFHE.
    PhylomeDBiQ55GH4.

    Family and domain databases

    InterProiIPR008631. Glycogen_synth.
    [Graphical view]
    PANTHERiPTHR10176. PTHR10176. 1 hit.
    PfamiPF05693. Glycogen_syn. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q55GH4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIFGTPNSTF LENRLGSSTG MPFSSATSLN SGVDQMMNEL NIQQPTSHTV    50
    LFDLSWEVAK KVGGIYTVLK TKAPVTVEEY KSRYALIGPY NASTAPTEFE 100
    PLIPGPLSSP IIENMMKKYG IHVHFGKWLV EGYPKVFLID LHSSMHKLGE 150
    WRWDLMSGFE QAGDNETNET IVFGYQSALL LKEFAEANPN DKYIAHFHEW 200
    QASVGLILLK KWKVPVSTIF TTHATLLGRY LAAGGVDLYN QMQVLNMDFE 250
    ASKRGIYHRH WIEKKSAADS HVFTTVSEIT GYESEHILMR KPDVILPNGL 300
    KLDKFTALHE FQNLHAKYKG VLNEFVRGHF YGHYSDFDLD NTLYVFTAGR 350
    HEYFNKGVDM FLDSLAGLNK LLQQSGSKMT VVAFIIMPAA TNNFNVESLK 400
    GHSYLKDMRR TCNTIVEAMG ERLFEATSRG KMISPEELLS QEDLVMLKRR 450
    IFALKQKSSG PPVVTHNMIN DNDEILQHIR RIKLFNSQED RVKVIYHPEF 500
    LTSTNPLIPL DYTEFVRGCH LGIFPSYYEP FGMTPAECCA SGCPSITSNL 550
    TGFANYMSRA LQDTDSKGIF IVDRRFKSSR ETVDQMTQYL WKFTQLDRRQ 600
    RIELRNATEK LSELLDWRTL GKFYKTARAL ALERAFPPKP ISRSPSPSPS 650
    SSLKLSTGLS NQIELQQQQQ QQQPQPIGTT INLIPPSSNV SVTPTTTPTT 700
    TTTATTATTA PITTPKPNVI PINTGKENIT LLSPNSMSSL LSDSLNEFKK 750
    QQQQQQQSKT PTTPTTTSTT TTTPSTTAAA TNKSVLSNPT PTPSPNTSSF 800
    IPTNKGSTAT TTTTTATPTP TPSNNTNGKP FNPIEALTKS NSSSNFATTS 850
    TASVNTNNGG TNSPVSKSIP IPSSKSLK 878
    Length:878
    Mass (Da):97,515
    Last modified:May 24, 2005 - v1
    Checksum:iCA7F313E52021AB3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAFI02000003 Genomic DNA. Translation: EAL73290.1.
    RefSeqiXP_647210.1. XM_642118.1.

    Genome annotation databases

    EnsemblProtistsiDDB0231962; DDB0231962; DDB_G0267674.
    GeneIDi8616014.
    KEGGiddi:DDB_G0267674.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAFI02000003 Genomic DNA. Translation: EAL73290.1 .
    RefSeqi XP_647210.1. XM_642118.1.

    3D structure databases

    ProteinModelPortali Q55GH4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 44689.DDB_0231962.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi DDB0231962 ; DDB0231962 ; DDB_G0267674 .
    GeneIDi 8616014.
    KEGGi ddi:DDB_G0267674.

    Organism-specific databases

    dictyBasei DDB_G0267674. glcS.

    Phylogenomic databases

    eggNOGi COG0438.
    KOi K00693.
    OMAi YIAHFHE.
    PhylomeDBi Q55GH4.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .

    Family and domain databases

    InterProi IPR008631. Glycogen_synth.
    [Graphical view ]
    PANTHERi PTHR10176. PTHR10176. 1 hit.
    Pfami PF05693. Glycogen_syn. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Isolation and characterization of glycogen synthase in Dictyostelium discoideum."
      Williamson B.D., Favis R., Brickey D.A., Rutherford C.L.
      Dev. Genet. 19:350-364(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: PRELIMINARY NUCLEOTIDE SEQUENCE, FUNCTION.
    2. "The genome of the social amoeba Dictyostelium discoideum."
      Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B., Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T., Lehmann R., Hamlin N.
      , Davies R., Gaudet P., Fey P., Pilcher K., Chen G., Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N., Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E., Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N., Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D., Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T., Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D., Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A., Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M., Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A., Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y., Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C., Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R., Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.
      Nature 435:43-57(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: AX4.

    Entry informationi

    Entry nameiGYS_DICDI
    AccessioniPrimary (citable) accession number: Q55GH4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 16, 2008
    Last sequence update: May 24, 2005
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Dictyostelium discoideum
      Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3