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Protein

Probable asparagine--tRNA ligase, mitochondrial

Gene

asnS2

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn).

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Probable asparagine--tRNA ligase, mitochondrial (EC:6.1.1.22)
Alternative name(s):
Asparaginyl-tRNA synthetase
Short name:
AsnRS
Gene namesi
Name:asnS2
ORF Names:DDB_G0268100
OrganismiDictyostelium discoideum (Slime mold)
Taxonomic identifieri44689 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium
Proteomesi
  • UP000002195 Componentsi: Chromosome 1, Unassembled WGS sequence

Organism-specific databases

dictyBaseiDDB_G0268100. asnS2.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini? – 460Probable asparagine--tRNA ligase, mitochondrialPRO_0000327476
Transit peptidei1 – ?MitochondrionSequence analysis

Proteomic databases

PaxDbiQ55FI3.

Interactioni

Protein-protein interaction databases

STRINGi44689.DDB0231334.

Structurei

3D structure databases

ProteinModelPortaliQ55FI3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG0554. Eukaryota.
COG0017. LUCA.
InParanoidiQ55FI3.
KOiK01893.
OMAiHDYMDEL.
PhylomeDBiQ55FI3.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
HAMAPiMF_00534. Asn_tRNA_synth. 1 hit.
InterProiIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004522. Asn-tRNA-ligase.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR012340. NA-bd_OB-fold.
IPR004365. NA-bd_OB_tRNA.
[Graphical view]
PANTHERiPTHR22594. PTHR22594. 1 hit.
PTHR22594:SF6. PTHR22594:SF6. 1 hit.
PfamiPF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti-codon. 1 hit.
[Graphical view]
PRINTSiPR01042. TRNASYNTHASP.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00457. asnS. 1 hit.
PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q55FI3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNIIKRFYK WPIRINEINK NNKDLIGKEI KVKGWVRNIR NQKSVSFIEL
60 70 80 90 100
GDGSSIKGLQ IVGDKDSFSK LKYGSSIEVN GKLINSLGND KEAIEVQLTE
110 120 130 140 150
PYKLIGNCPD CYPLQPKNHS FEFLRDIAHI RSRGNSIGAL LRVRNKSTQL
160 170 180 190 200
IHQYFNDNGF INVHTPIITA SDCEGGGEQF QIKSSLDTKE SMFFGQPSFL
210 220 230 240 250
TVSGQLEAEI YACSHSRVYT FGPTFRAEKS NTPRHLSEFW MIEPEMAFID
260 270 280 290 300
LNDNLDIAED FCKYLIRNLL DSCKEDIEFF NKRIDTNLLS RLEKTLSTPF
310 320 330 340 350
IRLEYKDAIQ LLQNNNHPIK WGDDIQREQE KFITTHFGEI PVFVINWPKS
360 370 380 390 400
IKPFYMRENE QTDHSNIMPT VSNMDLLVPT VGELIGGSIR EERYDKLLNT
410 420 430 440 450
INEMGMDKDQ YSWYLDLRKY GTVPHGGFGL GFERFLQFVT GLQNIKDVIP
460
IPRHQNYCKF
Length:460
Mass (Da):53,166
Last modified:May 24, 2005 - v1
Checksum:iD58FDB7FC4200947
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000003 Genomic DNA. Translation: EAL73503.1.
RefSeqiXP_647550.1. XM_642458.1.

Genome annotation databases

EnsemblProtistsiDDB0231334; DDB0231334; DDB_G0268100.
GeneIDi8616358.
KEGGiddi:DDB_G0268100.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000003 Genomic DNA. Translation: EAL73503.1.
RefSeqiXP_647550.1. XM_642458.1.

3D structure databases

ProteinModelPortaliQ55FI3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi44689.DDB0231334.

Proteomic databases

PaxDbiQ55FI3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiDDB0231334; DDB0231334; DDB_G0268100.
GeneIDi8616358.
KEGGiddi:DDB_G0268100.

Organism-specific databases

dictyBaseiDDB_G0268100. asnS2.

Phylogenomic databases

eggNOGiKOG0554. Eukaryota.
COG0017. LUCA.
InParanoidiQ55FI3.
KOiK01893.
OMAiHDYMDEL.
PhylomeDBiQ55FI3.

Miscellaneous databases

PROiQ55FI3.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
HAMAPiMF_00534. Asn_tRNA_synth. 1 hit.
InterProiIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004522. Asn-tRNA-ligase.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR012340. NA-bd_OB-fold.
IPR004365. NA-bd_OB_tRNA.
[Graphical view]
PANTHERiPTHR22594. PTHR22594. 1 hit.
PTHR22594:SF6. PTHR22594:SF6. 1 hit.
PfamiPF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti-codon. 1 hit.
[Graphical view]
PRINTSiPR01042. TRNASYNTHASP.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00457. asnS. 1 hit.
PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSYNM_DICDI
AccessioniPrimary (citable) accession number: Q55FI3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 8, 2008
Last sequence update: May 24, 2005
Last modified: September 7, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. Dictyostelium discoideum
    Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.