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Protein

60S ribosomal protein L35a

Gene

rpl35a

Organism
Dictyostelium discoideum (Slime mold)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

The protein was found to bind to both initiator and elongator tRNAs and consequently was assigned to the P site or P and A site.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, tRNA-binding

Enzyme and pathway databases

ReactomeiR-DDI-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-DDI-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-DDI-6791226. Major pathway of rRNA processing in the nucleolus.
R-DDI-72689. Formation of a pool of free 40S subunits.
R-DDI-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-DDI-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-DDI-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L35a
Gene namesi
Name:rpl35a
ORF Names:DDB_G0270424
OrganismiDictyostelium discoideum (Slime mold)
Taxonomic identifieri44689 [NCBI]
Taxonomic lineageiEukaryotaAmoebozoaMycetozoaDictyosteliidaDictyostelium
Proteomesi
  • UP000002195 Componentsi: Chromosome 1, Unassembled WGS sequence

Organism-specific databases

dictyBaseiDDB_G0270424. rpl35a.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 10510560S ribosomal protein L35aPRO_0000320044Add
BLAST

Proteomic databases

PaxDbiQ55BN7.
PRIDEiQ55BN7.

Interactioni

Protein-protein interaction databases

STRINGi44689.DDB0231153.

Structurei

3D structure databases

ProteinModelPortaliQ55BN7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L35Ae family.Curated

Phylogenomic databases

eggNOGiKOG0887. Eukaryota.
COG2451. LUCA.
InParanoidiQ55BN7.
KOiK02917.
OMAiSTRLYSK.
PhylomeDBiQ55BN7.

Family and domain databases

InterProiIPR001780. Ribosomal_L35A.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERiPTHR10902. PTHR10902. 1 hit.
PfamiPF01247. Ribosomal_L35Ae. 1 hit.
[Graphical view]
ProDomiPD012670. Ribosomal_L35Ae. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50447. SSF50447. 1 hit.

Sequencei

Sequence statusi: Complete.

Q55BN7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKIYSKGVV LGYRRSQATQ YPNISLIKIE GVVSREDSTF YLGKKVCLVS
60 70 80 90 100
KVSKSAKNPT GHKISWGKIC KTHGSSGVVQ ARFARNLPPK AMGAPVRVML

YPSNI
Length:105
Mass (Da):11,541
Last modified:May 24, 2005 - v1
Checksum:i04E4C8F7DFF40CD7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000005 Genomic DNA. Translation: EAL72562.1.
RefSeqiXP_646794.1. XM_641702.1.

Genome annotation databases

EnsemblProtistsiDDB0231153; DDB0231153; DDB_G0270424.
GeneIDi8617767.
KEGGiddi:DDB_G0270424.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAFI02000005 Genomic DNA. Translation: EAL72562.1.
RefSeqiXP_646794.1. XM_641702.1.

3D structure databases

ProteinModelPortaliQ55BN7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi44689.DDB0231153.

Proteomic databases

PaxDbiQ55BN7.
PRIDEiQ55BN7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiDDB0231153; DDB0231153; DDB_G0270424.
GeneIDi8617767.
KEGGiddi:DDB_G0270424.

Organism-specific databases

dictyBaseiDDB_G0270424. rpl35a.

Phylogenomic databases

eggNOGiKOG0887. Eukaryota.
COG2451. LUCA.
InParanoidiQ55BN7.
KOiK02917.
OMAiSTRLYSK.
PhylomeDBiQ55BN7.

Enzyme and pathway databases

ReactomeiR-DDI-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-DDI-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-DDI-6791226. Major pathway of rRNA processing in the nucleolus.
R-DDI-72689. Formation of a pool of free 40S subunits.
R-DDI-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-DDI-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-DDI-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

PROiQ55BN7.

Family and domain databases

InterProiIPR001780. Ribosomal_L35A.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERiPTHR10902. PTHR10902. 1 hit.
PfamiPF01247. Ribosomal_L35Ae. 1 hit.
[Graphical view]
ProDomiPD012670. Ribosomal_L35Ae. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF50447. SSF50447. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiRL35A_DICDI
AccessioniPrimary (citable) accession number: Q55BN7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: May 24, 2005
Last modified: July 6, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Dictyostelium discoideum
    Dictyostelium discoideum: entries, gene names and cross-references to dictyBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.