Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

NarL subfamily

Gene

slr0312

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi164 – 183H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
NarL subfamilyImported
Gene namesi
Ordered Locus Names:slr0312Imported
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)Imported
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaSynechococcalesMerismopediaceaeSynechocystis
Proteomesi
  • UP000001425 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei594-aspartylphosphatePROSITE-ProRule annotation1

Interactioni

Protein-protein interaction databases

IntActiQ55919. 3 interactors.
STRINGi1148.SYNGTS_2719.

Structurei

3D structure databases

ProteinModelPortaliQ55919.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 124Response regulatoryInterPro annotationAdd BLAST117
Domaini140 – 205HTH luxR-typeInterPro annotationAdd BLAST66

Phylogenomic databases

HOGENOMiHOG000034813.
InParanoidiQ55919.
KOiK02479.
OMAiNVHNRVQ.
PhylomeDBiQ55919.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
cd00156. REC. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR011006. CheY-like_superfamily.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEiView protein in PROSITE
PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.

Sequencei

Sequence statusi: Complete.

Q55919-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQATTIRVL IADDHAIFRQ GLATIINRDP DMQVIAQAEN GEQAIALFEE
60 70 80 90 100
HQPDVTLMDL RMPEVEGVAA ISAICAIVKF ARIIVLTTYD SDEDIYRGLQ
110 120 130 140 150
AGAKGYLLKE TEPDELLNAI RTVHRGQKYI PPDVGAKLVQ RLSNPELSER
160 170 180 190 200
ELEVLGSLAQ GMSNADIATA LSIGEGTVKS HVNRILNKLD VGDRTQAVIV

AVKRGIVSL
Length:209
Mass (Da):22,752
Last modified:November 1, 1996 - v1
Checksum:i3C55DBEEA49A9C18
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10682.1.
PIRiS76990.

Genome annotation databases

EnsemblBacteriaiBAA10682; BAA10682; BAA10682.
KEGGisyn:slr0312.

Similar proteinsi

Entry informationi

Entry nameiQ55919_SYNY3
AccessioniPrimary (citable) accession number: Q55919
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: September 27, 2017
This is version 127 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported