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Q55914 (Y309_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 84. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Uncharacterized methyltransferase slr0309

EC=2.1.1.-
Gene names
Ordered Locus Names:slr0309
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length473 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 4Fe-4S cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine Potential.

Sequence similarities

Belongs to the methyltransferase superfamily.

Contains 1 B12-binding domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 473473Uncharacterized methyltransferase slr0309
PRO_0000157869

Regions

Domain1 – 141141B12-binding

Sites

Metal binding1771Iron-sulfur (4Fe-4S-S-AdoMet) Potential
Metal binding1811Iron-sulfur (4Fe-4S-S-AdoMet) Potential
Metal binding1841Iron-sulfur (4Fe-4S-S-AdoMet) Potential

Sequences

Sequence LengthMass (Da)Tools
Q55914 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: A9B942A52426175C

FASTA47354,477
        10         20         30         40         50         60 
MEHKPNEFVK RAMKIDIIIV YIQRYRKGHE VHFVPPLTGI HLAALTPAKH TVRVIHQQVE 

        70         80         90        100        110        120 
TVNLDSEADV IVLSFFSGFA PEAYRLATEY RKRGKITIAG GPHVTFAPEE ALRFVDSIVI 

       130        140        150        160        170        180 
GEGESVWEQI FQDIEQNTLQ QRYIGEAIPL TNIPTPRYDL LPPQYFIRRV VQATRGCPFT 

       190        200        210        220        230        240 
CSFCTVPVLN PGFRTRPVEA VLNDIRYNKF KWWWQRKTVW FWDDNLTANR PYIKELLRQM 

       250        260        270        280        290        300 
IPLRKWWLTQ ASMDITKDDE LLDLMRDSGC IGIFFGIESF GQESLEDAGK RQNKVAEYQG 

       310        320        330        340        350        360 
KIKKLHDRGI GVMAGFISGL DGDTPESIRD MANQLEEIGV DVPFLSILTP FKGTRSYSKM 

       370        380        390        400        410        420 
MDTDRLRSDL GWEFYNGYNV TFVPSKMTPA ELLKAHRDLW RSAFSLQAIF RRIGRSLFTL 

       430        440        450        460        470 
RGGAMMMCSI MNLFYGLKAL TNNEPISFEG TDEYKSIRET IDLIPYSRQN SLS 

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27184 / PCC 6803 / N-1.
[2]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA10677.1.
PIRS76985.
RefSeqNP_442606.1. NC_000911.1.
YP_007452482.1. NC_020286.1.

3D structure databases

ProteinModelPortalQ55914.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ55914. 3 interactions.
STRING1148.slr0309.

Proteomic databases

PaxDbQ55914.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA10677; BAA10677; BAA10677.
GeneID14618164.
952228.
KEGGsyn:slr0309.
syz:MYO_127400.
PATRIC23842946. VBISynSp132158_3011.

Phylogenomic databases

eggNOGCOG1032.
OMADSINGDP.
OrthoDBEOG6M3PD4.
PhylomeDBQ55914.
ProtClustDBCLSK893643.

Enzyme and pathway databases

BioCycSSP1148:GJOT-2760-MONOMER.

Family and domain databases

Gene3D3.80.30.20. 1 hit.
InterProIPR006158. Cobalamin-bd.
IPR006638. Elp3/MiaB/NifB.
IPR023970. MeThioTfrase/rSAM.
IPR007197. rSAM.
IPR023404. rSAM_horseshoe.
[Graphical view]
PANTHERPTHR11918. PTHR11918. 1 hit.
PfamPF02310. B12-binding. 1 hit.
PF04055. Radical_SAM. 1 hit.
[Graphical view]
SMARTSM00729. Elp3. 1 hit.
[Graphical view]
PROSITEPS51332. B12_BINDING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY309_SYNY3
AccessionPrimary (citable) accession number: Q55914
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: November 1, 1996
Last modified: April 16, 2014
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families