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Q55870 (Q55870_SYNY3) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 106. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:slr0626 EMBL BAA10629.1
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length398 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   DomainRepeat RuleBase RU003537
TPR repeat RuleBase RU003339
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q55870 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 25810B309ABFC07E

FASTA39844,370
        10         20         30         40         50         60 
MSMPRLSLCM IVQNEAAFLG DCLASVASLV DEIVIADTGS TDNTVEIATQ AGAKVITVPW 

        70         80         90        100        110        120 
QDDFALARNQ ALAATTGDWV LVLDADERLN ILVKDGIEKA IAMDNALVVN LMRHELGSNQ 

       130        140        150        160        170        180 
SPYSLVSRLF RRHPAVQFNR AYHETIDDSV LALLTQEPDW QVIDLPGVAI LHQGYDPTLL 

       190        200        210        220        230        240 
RQRGKTQRAK HLLEKARVDN PQDPYLCSKL GALYFSLGDE KEGVKLLKQG LKSNTASIPV 

       250        260        270        280        290        300 
RFELHYHLAN AYRRQQKWEL ARKHYQKALD EEILLPLKLG ALINYGAFLQ DLGELGEAIK 

       310        320        330        340        350        360 
LYQAVIHIDP SQAIAFFNLA MIYKAQGNLL EAIKGYQEAI TLQPDYAEAY QNLAVTSFKA 

       370        380        390 
GLIQESVDAF QQAIALYEQR QSPEADRLRK NLGEMGLI 

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA10629.1.
PIRS76685.
RefSeqNP_442559.1. NC_000911.1.
YP_005652620.1. NC_017277.1.
YP_007452435.1. NC_020286.1.

3D structure databases

ProteinModelPortalQ55870.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ55870. 2 interactions.
STRING1148.slr0626.

Protein family/group databases

CAZyGT2. Glycosyltransferase Family 2.

Proteomic databases

PaxDbQ55870.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA10629; BAA10629; BAA10629.
GeneID953309.
KEGGsyn:slr0626.
syy:SYNGTS_2667.
syz:MYO_126920.
PATRIC23842842. VBISynSp132158_2960.

Phylogenomic databases

eggNOGCOG0463.
HOGENOMHOG000234264.
OMAELHYHLG.
PhylomeDBQ55870.

Family and domain databases

Gene3D1.25.40.10. 3 hits.
3.90.550.10. 1 hit.
InterProIPR001173. Glyco_trans_2-like.
IPR029044. Nucleotide-diphossugar_trans.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamPF00535. Glycos_transf_2. 1 hit.
PF00515. TPR_1. 2 hits.
[Graphical view]
SMARTSM00028. TPR. 5 hits.
[Graphical view]
SUPFAMSSF53448. SSF53448. 1 hit.
PROSITEPS50005. TPR. 5 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ55870_SYNY3
AccessionPrimary (citable) accession number: Q55870
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 9, 2014
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)