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Q55870

- Q55870_SYNY3

UniProt

Q55870 - Q55870_SYNY3

Protein
Submitted name:

Slr0626 protein

Gene

slr0626

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 107 (01 Oct 2014)
      Sequence version 1 (01 Nov 1996)
      Previous versions | rss
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    Functioni

    Protein family/group databases

    CAZyiGT2. Glycosyltransferase Family 2.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Slr0626 proteinImported
    Gene namesi
    Ordered Locus Names:slr0626Imported
    OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)Imported
    Taxonomic identifieri1111708 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
    ProteomesiUP000001425: Chromosome

    PTM / Processingi

    Proteomic databases

    PaxDbiQ55870.

    Interactioni

    Protein-protein interaction databases

    IntActiQ55870. 2 interactions.
    STRINGi1148.slr0626.

    Structurei

    3D structure databases

    ProteinModelPortaliQ55870.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    RepeatUniRule annotation, TPR repeatUniRule annotation

    Phylogenomic databases

    eggNOGiCOG0463.
    HOGENOMiHOG000234264.
    OMAiELHYHLG.
    PhylomeDBiQ55870.

    Family and domain databases

    Gene3Di1.25.40.10. 3 hits.
    3.90.550.10. 1 hit.
    InterProiIPR001173. Glyco_trans_2-like.
    IPR029044. Nucleotide-diphossugar_trans.
    IPR013026. TPR-contain_dom.
    IPR011990. TPR-like_helical.
    IPR001440. TPR_1.
    IPR019734. TPR_repeat.
    [Graphical view]
    PfamiPF00535. Glycos_transf_2. 1 hit.
    PF00515. TPR_1. 2 hits.
    [Graphical view]
    SMARTiSM00028. TPR. 5 hits.
    [Graphical view]
    SUPFAMiSSF53448. SSF53448. 1 hit.
    PROSITEiPS50005. TPR. 5 hits.
    PS50293. TPR_REGION. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q55870-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSMPRLSLCM IVQNEAAFLG DCLASVASLV DEIVIADTGS TDNTVEIATQ    50
    AGAKVITVPW QDDFALARNQ ALAATTGDWV LVLDADERLN ILVKDGIEKA 100
    IAMDNALVVN LMRHELGSNQ SPYSLVSRLF RRHPAVQFNR AYHETIDDSV 150
    LALLTQEPDW QVIDLPGVAI LHQGYDPTLL RQRGKTQRAK HLLEKARVDN 200
    PQDPYLCSKL GALYFSLGDE KEGVKLLKQG LKSNTASIPV RFELHYHLAN 250
    AYRRQQKWEL ARKHYQKALD EEILLPLKLG ALINYGAFLQ DLGELGEAIK 300
    LYQAVIHIDP SQAIAFFNLA MIYKAQGNLL EAIKGYQEAI TLQPDYAEAY 350
    QNLAVTSFKA GLIQESVDAF QQAIALYEQR QSPEADRLRK NLGEMGLI 398
    Length:398
    Mass (Da):44,370
    Last modified:November 1, 1996 - v1
    Checksum:i25810B309ABFC07E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10629.1.
    PIRiS76685.
    RefSeqiNP_442559.1. NC_000911.1.
    YP_005652620.1. NC_017277.1.
    YP_007452435.1. NC_020286.1.

    Genome annotation databases

    EnsemblBacteriaiBAA10629; BAA10629; BAA10629.
    GeneIDi953309.
    KEGGisyn:slr0626.
    syy:SYNGTS_2667.
    syz:MYO_126920.
    PATRICi23842842. VBISynSp132158_2960.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000022 Genomic DNA. Translation: BAA10629.1 .
    PIRi S76685.
    RefSeqi NP_442559.1. NC_000911.1.
    YP_005652620.1. NC_017277.1.
    YP_007452435.1. NC_020286.1.

    3D structure databases

    ProteinModelPortali Q55870.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    IntActi Q55870. 2 interactions.
    STRINGi 1148.slr0626.

    Protein family/group databases

    CAZyi GT2. Glycosyltransferase Family 2.

    Proteomic databases

    PaxDbi Q55870.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAA10629 ; BAA10629 ; BAA10629 .
    GeneIDi 953309.
    KEGGi syn:slr0626.
    syy:SYNGTS_2667.
    syz:MYO_126920.
    PATRICi 23842842. VBISynSp132158_2960.

    Phylogenomic databases

    eggNOGi COG0463.
    HOGENOMi HOG000234264.
    OMAi ELHYHLG.
    PhylomeDBi Q55870.

    Family and domain databases

    Gene3Di 1.25.40.10. 3 hits.
    3.90.550.10. 1 hit.
    InterProi IPR001173. Glyco_trans_2-like.
    IPR029044. Nucleotide-diphossugar_trans.
    IPR013026. TPR-contain_dom.
    IPR011990. TPR-like_helical.
    IPR001440. TPR_1.
    IPR019734. TPR_repeat.
    [Graphical view ]
    Pfami PF00535. Glycos_transf_2. 1 hit.
    PF00515. TPR_1. 2 hits.
    [Graphical view ]
    SMARTi SM00028. TPR. 5 hits.
    [Graphical view ]
    SUPFAMi SSF53448. SSF53448. 1 hit.
    PROSITEi PS50005. TPR. 5 hits.
    PS50293. TPR_REGION. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
      Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
      , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 6803 / KazusaImported.

    Entry informationi

    Entry nameiQ55870_SYNY3
    AccessioniPrimary (citable) accession number: Q55870
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 1, 1996
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 107 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3