Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Slr0626 protein

Gene

slr0626

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Protein family/group databases

CAZyiGT2. Glycosyltransferase Family 2.

Names & Taxonomyi

Protein namesi
Submitted name:
Slr0626 proteinImported
Gene namesi
Ordered Locus Names:slr0626Imported
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)Imported
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PaxDbiQ55870.

Interactioni

Protein-protein interaction databases

IntActiQ55870. 2 interactions.
STRINGi1148.slr0626.

Structurei

3D structure databases

ProteinModelPortaliQ55870.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

RepeatUniRule annotation, TPR repeatUniRule annotation

Phylogenomic databases

eggNOGiCOG0463.
HOGENOMiHOG000234264.
InParanoidiQ55870.
OMAiELHYHLG.
PhylomeDBiQ55870.

Family and domain databases

Gene3Di1.25.40.10. 3 hits.
3.90.550.10. 1 hit.
InterProiIPR001173. Glyco_trans_2-like.
IPR029044. Nucleotide-diphossugar_trans.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF00535. Glycos_transf_2. 1 hit.
PF00515. TPR_1. 2 hits.
[Graphical view]
SMARTiSM00028. TPR. 5 hits.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.
PROSITEiPS50005. TPR. 5 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q55870-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSMPRLSLCM IVQNEAAFLG DCLASVASLV DEIVIADTGS TDNTVEIATQ
60 70 80 90 100
AGAKVITVPW QDDFALARNQ ALAATTGDWV LVLDADERLN ILVKDGIEKA
110 120 130 140 150
IAMDNALVVN LMRHELGSNQ SPYSLVSRLF RRHPAVQFNR AYHETIDDSV
160 170 180 190 200
LALLTQEPDW QVIDLPGVAI LHQGYDPTLL RQRGKTQRAK HLLEKARVDN
210 220 230 240 250
PQDPYLCSKL GALYFSLGDE KEGVKLLKQG LKSNTASIPV RFELHYHLAN
260 270 280 290 300
AYRRQQKWEL ARKHYQKALD EEILLPLKLG ALINYGAFLQ DLGELGEAIK
310 320 330 340 350
LYQAVIHIDP SQAIAFFNLA MIYKAQGNLL EAIKGYQEAI TLQPDYAEAY
360 370 380 390
QNLAVTSFKA GLIQESVDAF QQAIALYEQR QSPEADRLRK NLGEMGLI
Length:398
Mass (Da):44,370
Last modified:November 1, 1996 - v1
Checksum:i25810B309ABFC07E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10629.1.
PIRiS76685.
RefSeqiNP_442559.1. NC_000911.1.
YP_005652620.1. NC_017277.1.
YP_007452435.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA10629; BAA10629; BAA10629.
KEGGisyn:slr0626.
PATRICi23842842. VBISynSp132158_2960.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10629.1.
PIRiS76685.
RefSeqiNP_442559.1. NC_000911.1.
YP_005652620.1. NC_017277.1.
YP_007452435.1. NC_020286.1.

3D structure databases

ProteinModelPortaliQ55870.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ55870. 2 interactions.
STRINGi1148.slr0626.

Protein family/group databases

CAZyiGT2. Glycosyltransferase Family 2.

Proteomic databases

PaxDbiQ55870.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA10629; BAA10629; BAA10629.
KEGGisyn:slr0626.
PATRICi23842842. VBISynSp132158_2960.

Phylogenomic databases

eggNOGiCOG0463.
HOGENOMiHOG000234264.
InParanoidiQ55870.
OMAiELHYHLG.
PhylomeDBiQ55870.

Family and domain databases

Gene3Di1.25.40.10. 3 hits.
3.90.550.10. 1 hit.
InterProiIPR001173. Glyco_trans_2-like.
IPR029044. Nucleotide-diphossugar_trans.
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR001440. TPR_1.
IPR019734. TPR_repeat.
[Graphical view]
PfamiPF00535. Glycos_transf_2. 1 hit.
PF00515. TPR_1. 2 hits.
[Graphical view]
SMARTiSM00028. TPR. 5 hits.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.
PROSITEiPS50005. TPR. 5 hits.
PS50293. TPR_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / KazusaImported.

Entry informationi

Entry nameiQ55870_SYNY3
AccessioniPrimary (citable) accession number: Q55870
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: April 1, 2015
This is version 111 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.