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Q55860

- COBQ_SYNY3

UniProt

Q55860 - COBQ_SYNY3

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Protein
Cobyric acid synthase
Gene
cobQ, cbiP, slr0618
Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH2 groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation By similarity.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei331 – 3311Nucleophile By similarity
Active sitei431 – 4311 By similarity

GO - Molecular functioni

  1. cobalamin-transporting ATPase activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. cobalamin biosynthetic process Source: UniProtKB-HAMAP
  2. glutamine metabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Biological processi

Cobalamin biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00148.

Names & Taxonomyi

Protein namesi
Recommended name:
Cobyric acid synthase
Gene namesi
Name:cobQ
Synonyms:cbiP
Ordered Locus Names:slr0618
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 498498Cobyric acid synthaseUniRule annotation
PRO_0000141336Add
BLAST

Interactioni

Protein-protein interaction databases

IntActiQ55860. 1 interaction.
STRINGi1148.slr0618.

Structurei

3D structure databases

ProteinModelPortaliQ55860.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini250 – 439190GATase cobBQ-type
Add
BLAST

Sequence similaritiesi

Keywords - Domaini

Glutamine amidotransferase

Phylogenomic databases

eggNOGiCOG1492.
HOGENOMiHOG000224803.
KOiK02232.
OMAiYPRTSNH.
OrthoDBiEOG6M9F07.
PhylomeDBiQ55860.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
3.40.50.880. 1 hit.
HAMAPiMF_00028. CobQ.
InterProiIPR029062. Class_I_gatase-like.
IPR017929. CobB/CobQ_GATase.
IPR002586. CobQ/CobB/MinD/ParA_Nub-bd_dom.
IPR004459. CobQ_synth.
IPR011698. GATase_3.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF01656. CbiA. 1 hit.
PF07685. GATase_3. 1 hit.
[Graphical view]
SUPFAMiSSF52317. SSF52317. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00313. cobQ. 1 hit.
PROSITEiPS51274. GATASE_COBBQ. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q55860-1 [UniParc]FASTAAdd to Basket

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MKAIMVVGTT SHAGKSFLTT GLCRLLRRRG DRVTPFKGQN MALNAFVTID    50
GGEMGHAQAV QAWAAGTVPR VAMNPILLKP QGDMTSQVIM LGQAVGTTRA 100
QEYYQNYFDR GWQAIANSLE TLAQDFDVVV CEGAGSPAEI NLKHRDLTNM 150
RVATHLQAAT ILIADIDRGG VFAHVVGTLQ LLEPEERKLI KGIVINKFRG 200
QRSLLDSGIT WLEEYTGIPV LGVIPYGQNL FSAEDSLDIL ERSGRPSKED 250
IRIVVLRLPR IANFTDFEPL EAESGVYVDY LPLEKQLGNP DAVIIPGSKT 300
TIADLQALQN SGMAQQIMDY AQAGGTVMGI CGGYQMLGQT IADPENIEGN 350
VSNCQGLGLL PLTTVINQEK ITRQCQTITH APPSGLTVTG YEIHQGLSRR 400
SEHSQDFLPM FDQEELGMVN AQQNLWGCYL HGLFDNGAWR RCWLNNLRQR 450
RGLDPLPTSI GNYQEQREGM LDSLADFVET HVNLEPILQS LPEENETP 498
Length:498
Mass (Da):54,813
Last modified:May 30, 2000 - v2
Checksum:iAA265C71E2829299
GO

Sequence cautioni

The sequence BAA10617.1 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10617.1. Different initiation.
PIRiS76673.
RefSeqiNP_442547.1. NC_000911.1.
YP_007452423.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA10617; BAA10617; BAA10617.
GeneIDi954919.
KEGGisyn:slr0618.
syz:MYO_126800.
PATRICi23842818. VBISynSp132158_2948.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10617.1 . Different initiation.
PIRi S76673.
RefSeqi NP_442547.1. NC_000911.1.
YP_007452423.1. NC_020286.1.

3D structure databases

ProteinModelPortali Q55860.
ModBasei Search...

Protein-protein interaction databases

IntActi Q55860. 1 interaction.
STRINGi 1148.slr0618.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA10617 ; BAA10617 ; BAA10617 .
GeneIDi 954919.
KEGGi syn:slr0618.
syz:MYO_126800.
PATRICi 23842818. VBISynSp132158_2948.

Phylogenomic databases

eggNOGi COG1492.
HOGENOMi HOG000224803.
KOi K02232.
OMAi YPRTSNH.
OrthoDBi EOG6M9F07.
PhylomeDBi Q55860.

Enzyme and pathway databases

UniPathwayi UPA00148 .

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
3.40.50.880. 1 hit.
HAMAPi MF_00028. CobQ.
InterProi IPR029062. Class_I_gatase-like.
IPR017929. CobB/CobQ_GATase.
IPR002586. CobQ/CobB/MinD/ParA_Nub-bd_dom.
IPR004459. CobQ_synth.
IPR011698. GATase_3.
IPR027417. P-loop_NTPase.
[Graphical view ]
Pfami PF01656. CbiA. 1 hit.
PF07685. GATase_3. 1 hit.
[Graphical view ]
SUPFAMi SSF52317. SSF52317. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00313. cobQ. 1 hit.
PROSITEi PS51274. GATASE_COBBQ. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
    Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
    DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27184 / PCC 6803 / N-1.
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiCOBQ_SYNY3
AccessioniPrimary (citable) accession number: Q55860
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: May 30, 2000
Last modified: July 9, 2014
This is version 90 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families
  3. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

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