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Q55810 (Y090_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 85. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein slr0090
Gene names
Ordered Locus Names:slr0090
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length339 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Binds 1 iron ion per subunit By similarity.

Sequence similarities

Belongs to the 4HPPD family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 339339Uncharacterized protein slr0090
PRO_0000088416

Sites

Metal binding1441Iron By similarity
Metal binding2221Iron By similarity
Metal binding3061Iron By similarity

Sequences

Sequence LengthMass (Da)Tools
Q55810 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 49A7039DD6371160

FASTA33938,590
        10         20         30         40         50         60 
MEFDYLHLYV DDYQSAHRCY QRQWGFTCVN KIITDQGITG IYQQGQILLL ISASESSLSR 

        70         80         90        100        110        120 
YADYLQKHPP GVGEVAWQVA NWQKIQHQLS ELQIETTPVI HPLTKAEGLT FLLWGDVHHS 

       130        140        150        160        170        180 
IYPVRSELNQ NKTLHGVGLT TIDHVVLNIA ADQFTQASQW YQQVFGWSVQ QSFTVNTPHS 

       190        200        210        220        230        240 
GLYSEALASA NGKVQFNLNC PTNNSSQIQT FLANNHGAGI QHVAFSTTSI TRTVAHLRER 

       250        260        270        280        290        300 
GVNFLKIPTG YYQQQRNSSY FNYASLDWDT LQCLEILLDD QDNTGERLLL QIFSQPCYGV 

       310        320        330 
GTLFWEIIER RHRAKGFGQG NFQALYEAVE TLEKQLEVP 

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27184 / PCC 6803 / N-1.
[2]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA10563.1.
PIRS76619.
RefSeqNP_442493.1. NC_000911.1.
YP_005652554.1. NC_017277.1.
YP_007452369.1. NC_020286.1.

3D structure databases

ProteinModelPortalQ55810.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING1148.slr0090.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA10563; BAA10563; BAA10563.
GeneID12253866.
14618050.
952328.
KEGGsyn:slr0090.
syy:SYNGTS_2601.
syz:MYO_126260.
PATRIC23842694. VBISynSp132158_2886.

Phylogenomic databases

eggNOGCOG3185.
HOGENOMHOG000188687.
KOK00457.
OMACCENPET.
OrthoDBEOG68SVVG.
PhylomeDBQ55810.

Enzyme and pathway databases

BioCycMetaCyc:MONOMER-13901.

Family and domain databases

InterProIPR005956. 4OHPhenylPyrv_dOase.
IPR004360. Glyas_Fos-R_dOase_dom.
[Graphical view]
PANTHERPTHR11959. PTHR11959. 1 hit.
PfamPF00903. Glyoxalase. 1 hit.
[Graphical view]
PIRSFPIRSF009283. HPP_dOase. 1 hit.
TIGRFAMsTIGR01263. 4HPPD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY090_SYNY3
AccessionPrimary (citable) accession number: Q55810
Entry history
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: April 16, 2014
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families