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Q55789 (Q55789_SYNY3) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 91. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:sll0088 EMBL BAA10541.1
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length240 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q55789 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 87D6BF0448A3627A

FASTA24027,370
        10         20         30         40         50         60 
MGVVLSVYWT ATHRFQNFLL LLLTMTLSSS HSTKEDILCY LLKEGQGSAI AMAEELGISP 

        70         80         90        100        110        120 
QAMRKHLKDL ENDGLIEHQQ ERQSMGRPQF LYQLSKQGRE QFPQRYGEFA LSFIDSLVET 

       130        140        150        160        170        180 
VGEEQLGAVL KKQWQRKAEA YRQQIGQGPL SKRVHKLVEL RRQEGYMAEI HPLSVEQAEK 

       190        200        210        220        230        240 
FILSEHHCAI ADVAESYPTV CGHELEMFAA ILPDCAIERT HWLNDGEHTC GYLIQSKTPN 

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References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA10541.1.
PIRS76597.
RefSeqNP_442471.1. NC_000911.1.
YP_005652532.1. NC_017277.1.
YP_007452347.1. NC_020286.1.

3D structure databases

ProteinModelPortalQ55789.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ55789. 2 interactions.
STRING1148.sll0088.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA10541; BAA10541; BAA10541.
GeneID952353.
KEGGsyn:sll0088.
syy:SYNGTS_2579.
syz:MYO_126040.
PATRIC23842648. VBISynSp132158_2863.

Phylogenomic databases

eggNOGCOG2345.
HOGENOMHOG000244966.
KOK09012.
OMAFPDTHAE.
PhylomeDBQ55789.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR014075. SUF_FeS_clus_asmb_SufR_cyano.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF13412. HTH_24. 1 hit.
[Graphical view]
TIGRFAMsTIGR02702. SufR_cyano. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ55789_SYNY3
AccessionPrimary (citable) accession number: Q55789
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: July 9, 2014
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)