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Q55761 (Y189_SYNY3) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 86. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
UPF0102 protein sll0189
Gene names
Ordered Locus Names:sll0189
OrganismSynechocystis sp. (strain PCC 6803 / Kazusa) [Reference proteome] [HAMAP]
Taxonomic identifier1111708 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis

Protein attributes

Sequence length150 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0102 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 150150UPF0102 protein sll0189 HAMAP-Rule MF_00048
PRO_0000167382

Sequences

Sequence LengthMass (Da)Tools
Q55761 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: BC98BD7AD02A7DD0

FASTA15016,960
        10         20         30         40         50         60 
MTDLGQAGES LVAAWLEQQG GKILQQRWRS PWGEIDLITH FPDTKIIAFV EVKTRSGGNW 

        70         80         90        100        110        120 
DQGGLLAVNA RKQEKIWQTA NHFLASQPQW SDWNCRFDVM IVFSQGSVPT GENAEGKFAN 

       130        140        150 
LPTNFQMGQT IVWQGYRLRL EQYLTDAFGG 

« Hide

References

[1]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27184 / PCC 6803 / N-1.
[2]"Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S. expand/collapse author list , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 6803 / Kazusa.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000022 Genomic DNA. Translation: BAA10408.1.
PIRS76562.
RefSeqNP_442338.1. NC_000911.1.
YP_005652398.1. NC_017277.1.
YP_007452214.1. NC_020286.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ55761. 2 interactions.
STRING1148.sll0189.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA10408; BAA10408; BAA10408.
GeneID12253618.
14617892.
952474.
KEGGsyn:sll0189.
syy:SYNGTS_2445.
syz:MYO_124700.
PATRIC23842350. VBISynSp132158_2715.

Phylogenomic databases

eggNOGCOG0792.
KOK07460.
OMARWRCRWG.
OrthoDBEOG6PP9TH.

Family and domain databases

Gene3D3.40.1350.10. 1 hit.
HAMAPMF_00048. UPF0102.
InterProIPR011335. Restrct_endonuc-II-like.
IPR011856. tRNA_endonuc-like_dom.
IPR003509. UPF0102.
[Graphical view]
PfamPF02021. UPF0102. 1 hit.
[Graphical view]
SUPFAMSSF52980. SSF52980. 1 hit.
TIGRFAMsTIGR00252. TIGR00252. 1 hit.
ProtoNetSearch...

Entry information

Entry nameY189_SYNY3
AccessionPrimary (citable) accession number: Q55761
Entry history
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: November 1, 1996
Last modified: February 19, 2014
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

Synechocystis PCC 6803

Synechocystis (strain PCC 6803): entries and gene names

SIMILARITY comments

Index of protein domains and families