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Protein

UPF0102 protein sll0189

Gene

sll0189

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0102 protein sll0189
Gene namesi
Ordered Locus Names:sll0189
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 150150UPF0102 protein sll0189PRO_0000167382Add
BLAST

Interactioni

Protein-protein interaction databases

IntActiQ55761. 2 interactions.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0102 family.Curated

Phylogenomic databases

eggNOGiCOG0792.
InParanoidiQ55761.
KOiK07460.
OMAiRWRCRWG.
OrthoDBiEOG6PP9TH.
PhylomeDBiQ55761.

Family and domain databases

Gene3Di3.40.1350.10. 1 hit.
HAMAPiMF_00048. UPF0102.
InterProiIPR011335. Restrct_endonuc-II-like.
IPR011856. tRNA_endonuc-like_dom.
IPR003509. UPF0102.
[Graphical view]
PfamiPF02021. UPF0102. 1 hit.
[Graphical view]
SUPFAMiSSF52980. SSF52980. 1 hit.
TIGRFAMsiTIGR00252. TIGR00252. 1 hit.

Sequencei

Sequence statusi: Complete.

Q55761-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDLGQAGES LVAAWLEQQG GKILQQRWRS PWGEIDLITH FPDTKIIAFV
60 70 80 90 100
EVKTRSGGNW DQGGLLAVNA RKQEKIWQTA NHFLASQPQW SDWNCRFDVM
110 120 130 140 150
IVFSQGSVPT GENAEGKFAN LPTNFQMGQT IVWQGYRLRL EQYLTDAFGG
Length:150
Mass (Da):16,960
Last modified:November 1, 1996 - v1
Checksum:iBC98BD7AD02A7DD0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10408.1.
PIRiS76562.

Genome annotation databases

EnsemblBacteriaiBAA10408; BAA10408; BAA10408.
KEGGisyy:SYNGTS_2445.
syz:MYO_124700.
PATRICi23842350. VBISynSp132158_2715.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10408.1.
PIRiS76562.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ55761. 2 interactions.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA10408; BAA10408; BAA10408.
KEGGisyy:SYNGTS_2445.
syz:MYO_124700.
PATRICi23842350. VBISynSp132158_2715.

Phylogenomic databases

eggNOGiCOG0792.
InParanoidiQ55761.
KOiK07460.
OMAiRWRCRWG.
OrthoDBiEOG6PP9TH.
PhylomeDBiQ55761.

Family and domain databases

Gene3Di3.40.1350.10. 1 hit.
HAMAPiMF_00048. UPF0102.
InterProiIPR011335. Restrct_endonuc-II-like.
IPR011856. tRNA_endonuc-like_dom.
IPR003509. UPF0102.
[Graphical view]
PfamiPF02021. UPF0102. 1 hit.
[Graphical view]
SUPFAMiSSF52980. SSF52980. 1 hit.
TIGRFAMsiTIGR00252. TIGR00252. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
    Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
    DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27184 / PCC 6803 / N-1.
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiY189_SYNY3
AccessioniPrimary (citable) accession number: Q55761
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: November 1, 1996
Last modified: July 22, 2015
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.