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Q55716

- SYGA_SYNY3

UniProt

Q55716 - SYGA_SYNY3

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Protein

Glycine--tRNA ligase alpha subunit

Gene
glyQ, slr0638
Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. glycine-tRNA ligase activity Source: UniProtKB-EC

GO - Biological processi

  1. glycyl-tRNA aminoacylation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Aminoacyl-tRNA synthetase, Ligase

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Glycine--tRNA ligase alpha subunit (EC:6.1.1.14)
Alternative name(s):
Glycyl-tRNA synthetase alpha subunit
Short name:
GlyRS
Gene namesi
Name:glyQ
Ordered Locus Names:slr0638
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 299299Glycine--tRNA ligase alpha subunitUniRule annotationPRO_0000072876Add
BLAST

Proteomic databases

PaxDbiQ55716.

Interactioni

Subunit structurei

Tetramer of two alpha and two beta subunits By similarity.

Protein-protein interaction databases

IntActiQ55716. 4 interactions.
STRINGi1148.slr0638.

Structurei

3D structure databases

ProteinModelPortaliQ55716.
SMRiQ55716. Positions 5-279.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0752.
HOGENOMiHOG000264291.
KOiK01878.
OMAiDEYHASS.
OrthoDBiEOG661H9S.
PhylomeDBiQ55716.

Family and domain databases

HAMAPiMF_00254. Gly_tRNA_synth_alpha.
InterProiIPR006194. Gly-tRNA-synth_heterodimer.
IPR002310. Gly-tRNA_ligase_asu.
[Graphical view]
PfamiPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSiPR01044. TRNASYNTHGA.
TIGRFAMsiTIGR00388. glyQ. 1 hit.
PROSITEiPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q55716-1 [UniParc]FASTAAdd to Basket

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MTITFQAVIA KLNEFWAQQG CLIAQPFDTE KGAGTMNPHT FLRAIGPEPW    50
SVAYVEPCRR PTDGRYGENP NRVQHYFQYQ VLIKPSPDNI QEVYLDSLRA 100
LGIQPEDHDI RFVEDNWESP TLGAWGVGWE VWLDGMEVTQ FTYFQQCGGI 150
DCRPVSIEIT YGLERLAMYL QNVEAIDQIQ WNEKLSYGDI FWQGEVEQCT 200
YNFEASNPDL LFQLFALYEQ EAGQLIERGL ALPSLEYVLK CSHAFNLLDA 250
RGVIAVTERT RYIGRIRNLA REVAHIYLQQ REALGFPLDK KVDKPISLV 299
Length:299
Mass (Da):34,363
Last modified:November 1, 1996 - v1
Checksum:i9B9BA19ABA059DE4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10357.1.
PIRiS76511.
RefSeqiNP_442287.1. NC_000911.1.
YP_005652347.1. NC_017277.1.
YP_007452163.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA10357; BAA10357; BAA10357.
GeneIDi952519.
KEGGisyn:slr0638.
syy:SYNGTS_2394.
syz:MYO_124190.
PATRICi23842230. VBISynSp132158_2655.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000022 Genomic DNA. Translation: BAA10357.1 .
PIRi S76511.
RefSeqi NP_442287.1. NC_000911.1.
YP_005652347.1. NC_017277.1.
YP_007452163.1. NC_020286.1.

3D structure databases

ProteinModelPortali Q55716.
SMRi Q55716. Positions 5-279.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi Q55716. 4 interactions.
STRINGi 1148.slr0638.

Proteomic databases

PaxDbi Q55716.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAA10357 ; BAA10357 ; BAA10357 .
GeneIDi 952519.
KEGGi syn:slr0638.
syy:SYNGTS_2394.
syz:MYO_124190.
PATRICi 23842230. VBISynSp132158_2655.

Phylogenomic databases

eggNOGi COG0752.
HOGENOMi HOG000264291.
KOi K01878.
OMAi DEYHASS.
OrthoDBi EOG661H9S.
PhylomeDBi Q55716.

Family and domain databases

HAMAPi MF_00254. Gly_tRNA_synth_alpha.
InterProi IPR006194. Gly-tRNA-synth_heterodimer.
IPR002310. Gly-tRNA_ligase_asu.
[Graphical view ]
Pfami PF02091. tRNA-synt_2e. 1 hit.
[Graphical view ]
PRINTSi PR01044. TRNASYNTHGA.
TIGRFAMsi TIGR00388. glyQ. 1 hit.
PROSITEi PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
    Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
    DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27184 / PCC 6803 / N-1.
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiSYGA_SYNY3
AccessioniPrimary (citable) accession number: Q55716
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1996
Last modified: July 9, 2014
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families
  3. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

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