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Protein

Uncharacterized protein sll0617

Gene

sll0617

Organism
Synechocystis sp. (strain PCC 6803 / Kazusa)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein sll0617
Gene namesi
Ordered Locus Names:sll0617
OrganismiSynechocystis sp. (strain PCC 6803 / Kazusa)
Taxonomic identifieri1111708 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechocystis
ProteomesiUP000001425 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 267267Uncharacterized protein sll0617PRO_0000166296Add
BLAST

Proteomic databases

PaxDbiQ55707.

Interactioni

Protein-protein interaction databases

STRINGi1148.SYNGTS_2382.

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili26 – 156131Sequence AnalysisAdd
BLAST

Sequence similaritiesi

Belongs to the PspA/IM30 family.Curated

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiCOG1842.
HOGENOMiHOG000227268.
InParanoidiQ55707.
KOiK03969.
OMAiQKTIIMR.
OrthoDBiEOG6H7FJ5.
PhylomeDBiQ55707.

Family and domain databases

InterProiIPR007157. PspA_IM30.
[Graphical view]
PfamiPF04012. PspA_IM30. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q55707-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGLFDRLGRV VRANLNDLVS KAEDPEKVLE QAVIDMQEDL VQLRQAVART
60 70 80 90 100
IAEEKRTEQR LNQDTQEAKK WEDRAKLALT NGEENLAREA LARKKSLTDT
110 120 130 140 150
AAAYQTQLAQ QRTMSENLRR NLAALEAKIS EAKTKKNMLQ ARAKAAKANA
160 170 180 190 200
ELQQTLGGLG TSSATSAFER MENKVLDMEA TSQAAGELAG FGIENQFAQL
210 220 230 240 250
EASSGVEDEL AALKASMAGG ALPGTSAATP QLEAAPVDSS VPANNASQDD
260
AVIDQELDDL RRRLNNL
Length:267
Mass (Da):28,905
Last modified:November 1, 1996 - v1
Checksum:i5DDE309FFB0FF1A6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10345.1.
PIRiS76499.
RefSeqiYP_005652335.1. NC_017277.1.
YP_007452151.1. NC_020286.1.

Genome annotation databases

EnsemblBacteriaiBAA10345; BAA10345; BAA10345.
KEGGisyn:sll0617.
PATRICi23842200. VBISynSp132158_2640.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000022 Genomic DNA. Translation: BAA10345.1.
PIRiS76499.
RefSeqiYP_005652335.1. NC_017277.1.
YP_007452151.1. NC_020286.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1148.SYNGTS_2382.

Proteomic databases

PaxDbiQ55707.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA10345; BAA10345; BAA10345.
KEGGisyn:sll0617.
PATRICi23842200. VBISynSp132158_2640.

Phylogenomic databases

eggNOGiCOG1842.
HOGENOMiHOG000227268.
InParanoidiQ55707.
KOiK03969.
OMAiQKTIIMR.
OrthoDBiEOG6H7FJ5.
PhylomeDBiQ55707.

Family and domain databases

InterProiIPR007157. PspA_IM30.
[Graphical view]
PfamiPF04012. PspA_IM30. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome."
    Kaneko T., Tanaka A., Sato S., Kotani H., Sazuka T., Miyajima N., Sugiura M., Tabata S.
    DNA Res. 2:153-166(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27184 / PCC 6803 / N-1.
  2. "Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions."
    Kaneko T., Sato S., Kotani H., Tanaka A., Asamizu E., Nakamura Y., Miyajima N., Hirosawa M., Sugiura M., Sasamoto S., Kimura T., Hosouchi T., Matsuno A., Muraki A., Nakazaki N., Naruo K., Okumura S., Shimpo S.
    , Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    DNA Res. 3:109-136(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 6803 / Kazusa.

Entry informationi

Entry nameiY617_SYNY3
AccessioniPrimary (citable) accession number: Q55707
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 1, 1996
Last modified: June 24, 2015
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Synechocystis PCC 6803
    Synechocystis (strain PCC 6803): entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.